RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 ZNF528Q3MIS6 628 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 C14orf28Q4W4Y0 310 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 TATDN1Q6P1N9 297 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 WDR88Q6ZMY6 472 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 CEACAM19Q7Z692 300 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 HIPK1Q86Z02 1210 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 PYROXD2Q8N2H3 581 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 ARL14Q8N4G2 192 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 CHCHD4Q8N4Q1 142 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 PHYHIPQ92561 330 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 BIRC7Q96CA5 298 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 TMEM237Q96Q45 408 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 TTYH2Q9BSA4 534 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 GPR174Q9BXC1 333 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 NLNQ9BYT8 704 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 NACA2Q9H009 215 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 TNMDQ9H2S6 317 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 RNF41Q9H4P4 317 aaPredicted RBP3.07□□□□□ -1.92
CD46-216ENST00000490278 FAM124BQ9H5Z6 455 aaPredicted RBP3.07□□□□□ -1.92
CD46-216ENST00000490278 AMBNQ9NP70 447 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 NRN1Q9NPD7 142 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 RPS10P5Q9NQ39 176 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 MIOXQ9UGB7 285 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 MLXQ9UH92 298 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 KLHDC2Q9Y2U9 406 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 SYNJ2O15056 1496 aa3.07□□□□□ -1.92
CD46-216ENST00000490278 COL2A1P02458 1487 aaPredicted RBP3.07□□□□□ -1.92
CD46-216ENST00000490278 NPIPA5A0A0B4J1W7 369 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 ERI2A8K979 691 aaKnown RBP3.06□□□□□ -1.92
CD46-216ENST00000490278 E9PAM4 449 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 NPIPA5E9PKD4 350 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 EI24O14681 340 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 BUB1O43683 1085 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 SEC22BO75396 215 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 VENTXO95231 258 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 ZMYM6O95789 1325 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 NUDT14O95848 222 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 MAGEA4P43358 317 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 SLC6A8P48029 635 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 MFAP2P55001 183 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 GAMTQ14353 236 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 ABRAXAS2Q15018 415 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 CNPY1Q3B7I2 92 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 EIPR1Q53HC9 387 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 GPRASP1Q5JY77 1395 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 ACER2Q5QJU3 275 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 LINC00242Q5T6M2 205 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 TAF3Q5VWG9 929 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 LIPKQ5VXJ0 399 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 FAM219BQ5XKK7 198 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 OR6B2Q6IFH4 312 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 FAM159AQ6UWV7 190 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 OLFM4Q6UX06 510 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 MFSD7Q6UXD7 560 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 APOOLQ6UXV4 268 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 DPY19L2P2Q6ZN68 376 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 STOX1Q6ZVD7 989 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 ADGRD2Q7Z7M1 963 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 RANBP3LQ86VV4 465 aaPredicted RBP3.06□□□□□ -1.92
CD46-216ENST00000490278 SLC39A11Q8N1S5 342 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 SUMF1Q8NBK3 374 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 OR8H1Q8NGG4 311 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 FAM173AQ9BQD7 235 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 ADGRL4Q9HBW9 690 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 STARD5Q9NSY2 213 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 CLEC5AQ9NY25 188 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.06□□□□□ -1.92
CD46-216ENST00000490278 RNF24Q9Y225 148 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 MMP24Q9Y5R2 645 aa3.06□□□□□ -1.92
CD46-216ENST00000490278 A0A087WWV3 80 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 RNF103-CHMP3A0A140T963 221 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 ZNF840PA6NDX5 716 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 ZNF487B1APH4 448 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 LRRTM2O43300 516 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 BCL2L11O43521 198 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 ZNF354AO60765 605 aaPredicted RBP3.05□□□□□ -1.92
CD46-216ENST00000490278 KBTBD11O94819 623 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 ECDO95905 644 aaPredicted RBP3.05□□□□□ -1.92
CD46-216ENST00000490278 IGHG3P01860 377 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 SNRPCP09234 159 aaKnown RBP3.05□□□□□ -1.92
CD46-216ENST00000490278 GP9P14770 177 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 SAA4P35542 130 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 VCPP55072 806 aaKnown RBP3.05□□□□□ -1.92
CD46-216ENST00000490278 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 MYBPC1Q00872 1141 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 CRMP1Q14194 572 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 CD226Q15762 336 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 AGKQ53H12 422 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 IL23RQ5VWK5 629 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 ZNF774Q6NX45 483 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 ATRAIDQ6UW56 229 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 AMZ2Q86W34 360 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 MARCH9Q86YJ5 346 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 OR6T1Q8NGN1 323 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 TBCKQ8TEA7 893 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 AGAP11Q8TF27 550 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 RAB3CQ96E17 227 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 NDUFAF3Q9BU61 184 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 ATG10Q9H0Y0 220 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 ZBP1Q9H171 429 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms