RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 NCK1P16333 377 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 S1PR1P21453 382 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 AGXTP21549 392 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 MATN1P21941 496 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 ETV5P41161 510 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 MAN2A2P49641 1150 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 PRIM2P49643 509 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 MRPS35P82673 323 aaKnown RBP13.23□□□□□ -0.29
VPS26A-205ENST00000489656 OCA2Q04671 838 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 VWA2Q5GFL6 755 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 MFSD12Q6NUT3 480 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 ZCCHC12Q6PEW1 402 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 FAM111BQ6SJ93 734 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 CYP2R1Q6VVX0 501 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 ZNF517Q6ZMY9 492 aaPredicted RBP13.23□□□□□ -0.29
VPS26A-205ENST00000489656 SPATA24Q86W54 205 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 GALNT12Q8IXK2 581 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 VWA5B2Q8N398 1253 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 ENDOVQ8N8Q3 282 aaKnown RBP13.23□□□□□ -0.29
VPS26A-205ENST00000489656 STT3BQ8TCJ2 826 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 SLC26A7Q8TE54 656 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 RIT1Q92963 219 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 ACTRT3Q9BYD9 372 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 B3GNT4Q9C0J1 378 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 WDR54Q9H977 334 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 S100A14Q9HCY8 104 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 CTSFQ9UBX1 484 aa13.23□□□□□ -0.29
VPS26A-205ENST00000489656 GVINP1Q7Z2Y8 2422 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 ZFHX2Q9C0A1 2572 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 AGRPO00253 132 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 PLD2O14939 933 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 COQ9O75208 318 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 KRT36O76013 467 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 SOX30O94993 753 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 CBX7O95931 251 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 KLK3P07288 261 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 TFPTP0C1Z6 253 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 ZNF28P17035 718 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 ITIH1P19827 911 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 EFNA3P52797 238 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 AP2B1P63010 937 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 MRPS22P82650 360 aaKnown RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 CDK6Q00534 326 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 NHLH1Q02575 133 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 FUT7Q11130 342 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 LASP1Q14847 261 aaKnown RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 MYBPC3Q14896 1274 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 NKG7Q16617 165 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 MINDY4Q4G0A6 757 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 TRMT12Q53H54 448 aaKnown RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 INTS11Q5TA45 600 aaKnown RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 FBXW10Q5XX13 1052 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 CDC73Q6P1J9 531 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 MRPL14Q6P1L8 145 aaKnown RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 TNFAIP8L2Q6P589 184 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 DGAT2L6Q6ZPD8 337 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 CCDC80Q76M96 950 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 SZRD1Q7Z422 152 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 SPPL2CQ8IUH8 684 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 EID3Q8N140 333 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 HIPK4Q8NE63 616 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 WDR36Q8NI36 951 aaKnown RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 FIG4Q92562 907 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 HOXB13Q92826 284 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 PMEPA1Q969W9 287 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 PPWD1Q96BP3 646 aaKnown RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 RSRC1Q96IZ7 334 aaKnown RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 MAGED4Q96JG8 741 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 VN1R1Q9GZP7 353 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 OR51I1Q9H343 314 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 RNPEPL1Q9HAU8 725 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 ADAP2Q9NPF8 381 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 DCAF13Q9NV06 445 aaKnown RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 GIN1Q9NXP7 522 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 IFT80Q9P2H3 777 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 NXT1Q9UKK6 140 aaKnown RBP13.22□□□□□ -0.29
VPS26A-205ENST00000489656 PCDHGA8Q9Y5G5 932 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 B3GALT1Q9Y5Z6 326 aa13.22□□□□□ -0.29
VPS26A-205ENST00000489656 MYOCOSA0A1B0GUC4 107 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 DHRS12A0PJE2 317 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 OR2W5A6NFC9 320 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 DUXAA6NLW8 204 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 H3BNX3 289 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 DLL1O00548 723 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 AGR2O95994 175 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 JMJD7P0C870 316 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 CEACAM1P13688 526 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 HOXB6P17509 224 aaKnown RBP13.21□□□□□ -0.29
VPS26A-205ENST00000489656 SLC7A1P30825 629 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 KDELR2P33947 212 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 MAP3K8P41279 467 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 PRKAG1P54619 331 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 CASP9P55211 416 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 CLDN6P56747 220 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 PCBP3P57721 371 aaKnown RBP13.21□□□□□ -0.29
VPS26A-205ENST00000489656 RPS26P62854 115 aaKnown RBP13.21□□□□□ -0.29
VPS26A-205ENST00000489656 SCARB2Q14108 478 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 ELOAQ14241 798 aaKnown RBP13.21□□□□□ -0.29
VPS26A-205ENST00000489656 ELAVL1Q15717 326 aaKnown RBP13.21□□□□□ -0.29
VPS26A-205ENST00000489656 GLIPR1L2Q4G1C9 344 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms