RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 MEOX1P50221 254 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 TDGF1P3P51864 188 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 NCBP2P52298 156 aaKnown RBP eCLIP16.02■□□□□ 0.15
MDC1-206ENST00000489540 DCAF7P61962 342 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 BST1Q10588 318 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 EXOSC7Q15024 291 aaKnown RBP16.02■□□□□ 0.15
MDC1-206ENST00000489540 FHL5Q5TD97 284 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 ATG16L1Q676U5 607 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 LYPD8Q6UX82 237 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 R3HCC1LQ7Z5L2 792 aaKnown RBP16.02■□□□□ 0.15
MDC1-206ENST00000489540 OR52R1Q8NGF1 315 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 PRR7Q8TB68 274 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 ARL8AQ96BM9 186 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 TSSK3Q96PN8 268 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 SACM1LQ9NTJ5 587 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 THAP1Q9NVV9 213 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 SPENQ96T58 3664 aaKnown RBP16.01■□□□□ 0.15
MDC1-206ENST00000489540 P04436 131 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 PRPS2P11908 318 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 GPX3P22352 226 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 RPL3P39023 403 aaKnown RBP16.01■□□□□ 0.15
MDC1-206ENST00000489540 MRPS35P82673 323 aaKnown RBP16.01■□□□□ 0.15
MDC1-206ENST00000489540 MAD2L1Q13257 205 aaPredicted RBP16.01■□□□□ 0.15
MDC1-206ENST00000489540 PRSS53Q2L4Q9 553 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 SMU1Q2TAY7 513 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 SLC22A10Q63ZE4 541 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 FAM26EQ8N5C1 309 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 CPSF7Q8N684 471 aaKnown RBP16.01■□□□□ 0.15
MDC1-206ENST00000489540 GOLGA6L1Q8N7Z2 621 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 FNDC5Q8NAU1 212 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 KAT2AQ92830 837 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 GFM2Q969S9 779 aaKnown RBP16.01■□□□□ 0.15
MDC1-206ENST00000489540 PPCDCQ96CD2 204 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 MTERF3Q96E29 417 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 ATP6V1G3Q96LB4 118 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 GLIPR2Q9H4G4 154 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 CNIH4Q9P003 139 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 SEC14L3Q9UDX4 400 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 EIF3LQ9Y262 564 aaKnown RBP16.01■□□□□ 0.15
MDC1-206ENST00000489540 NPFFR2Q9Y5X5 522 aa16.01■□□□□ 0.15
MDC1-206ENST00000489540 CLEC18AA5D8T8 446 aa16■□□□□ 0.15
MDC1-206ENST00000489540 ACOX3O15254 700 aa16■□□□□ 0.15
MDC1-206ENST00000489540 AKAP10O43572 662 aa16■□□□□ 0.15
MDC1-206ENST00000489540 LRATO95237 230 aa16■□□□□ 0.15
MDC1-206ENST00000489540 JUNP05412 331 aaKnown RBP16■□□□□ 0.15
MDC1-206ENST00000489540 ZNF24P17028 368 aa16■□□□□ 0.15
MDC1-206ENST00000489540 NAGAP17050 411 aa16■□□□□ 0.15
MDC1-206ENST00000489540 DRD5P21918 477 aa16■□□□□ 0.15
MDC1-206ENST00000489540 PPICP45877 212 aa16■□□□□ 0.15
MDC1-206ENST00000489540 TMED10P49755 219 aaKnown RBP16■□□□□ 0.15
MDC1-206ENST00000489540 EMDP50402 254 aa16■□□□□ 0.15
MDC1-206ENST00000489540 GPR85P60893 370 aa16■□□□□ 0.15
MDC1-206ENST00000489540 EMX2Q04743 252 aa16■□□□□ 0.15
MDC1-206ENST00000489540 DUSP8Q13202 625 aa16■□□□□ 0.15
MDC1-206ENST00000489540 PDE7AQ13946 482 aa16■□□□□ 0.15
MDC1-206ENST00000489540 PDCD2Q16342 344 aaPredicted RBP16■□□□□ 0.15
MDC1-206ENST00000489540 NTRK2Q16620 822 aa16■□□□□ 0.15
MDC1-206ENST00000489540 IL23RQ5VWK5 629 aa16■□□□□ 0.15
MDC1-206ENST00000489540 CLEC18BQ6UXF7 455 aa16■□□□□ 0.15
MDC1-206ENST00000489540 GFRALQ6UXV0 394 aa16■□□□□ 0.15
MDC1-206ENST00000489540 ZFP62Q8NB50 900 aaPredicted RBP16■□□□□ 0.15
MDC1-206ENST00000489540 CLEC18CQ8NCF0 446 aa16■□□□□ 0.15
MDC1-206ENST00000489540 PAQR8Q8TEZ7 354 aa16■□□□□ 0.15
MDC1-206ENST00000489540 HSPBAP1Q96EW2 488 aa16■□□□□ 0.15
MDC1-206ENST00000489540 LCORQ96JN0 433 aaPredicted RBP16■□□□□ 0.15
MDC1-206ENST00000489540 AMDHD1Q96NU7 426 aa16■□□□□ 0.15
MDC1-206ENST00000489540 FAM173AQ9BQD7 235 aa16■□□□□ 0.15
MDC1-206ENST00000489540 MANSC1Q9H8J5 431 aa16■□□□□ 0.15
MDC1-206ENST00000489540 SH2D2AQ9NP31 389 aa16■□□□□ 0.15
MDC1-206ENST00000489540 TAS2R9Q9NYW1 312 aa16■□□□□ 0.15
MDC1-206ENST00000489540 SH3BP4Q9P0V3 963 aa16■□□□□ 0.15
MDC1-206ENST00000489540 GIMAP2Q9UG22 337 aa16■□□□□ 0.15
MDC1-206ENST00000489540 SHANK1Q9Y566 2161 aa16■□□□□ 0.15
MDC1-206ENST00000489540 GCN1Q92616 2671 aaKnown RBP16■□□□□ 0.15
MDC1-206ENST00000489540 A0A087WV62 115 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 NPIPA5E9PKD4 350 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 PLOD2O00469 737 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 TP53I11O14683 189 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 PDPK1O15530 556 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 UNC5CO95185 931 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 IFI6P09912 130 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 HPCAL1P37235 193 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 UBAP2LQ14157 1087 aaKnown RBP15.99■□□□□ 0.15
MDC1-206ENST00000489540 BNC2Q6ZN30 1099 aaPredicted RBP15.99■□□□□ 0.15
MDC1-206ENST00000489540 RGS9BPQ6ZS82 235 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 GK5Q6ZS86 529 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 FAM47EQ6ZV65 393 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 SIAH3Q8IW03 269 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 LIX1Q8N485 282 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 SIMC1Q8NDZ2 872 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 OR2M7Q8NG81 312 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 OR7G2Q8NG99 324 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 CLHC1Q8NHS4 586 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 ZBED6CLQ96FA7 236 aaPredicted RBP15.99■□□□□ 0.15
MDC1-206ENST00000489540 GPR137Q96N19 417 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 ITPAQ9BY32 194 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 NXF5Q9H1B4 397 aaKnown RBP15.99■□□□□ 0.15
MDC1-206ENST00000489540 AKTIPQ9H8T0 292 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 DEPPQ9NTK1 212 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 ATP6V1HQ9UI12 483 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms