RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 RNH1P13489 461 aaKnown RBP18.15■□□□□ 0.5
CCM2-216ENST00000488727 HOXB6P17509 224 aaKnown RBP18.15■□□□□ 0.5
CCM2-216ENST00000488727 GZMMP51124 257 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 RAB38P57729 211 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 MERTKQ12866 999 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 SLC36A3Q495N2 470 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 KRT80Q6KB66 452 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 NOXRED1Q6NXP6 359 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 GALNT18Q6P9A2 607 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 PAGE2Q7Z2X7 111 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 SATL1Q86VE3 508 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 MICU2Q8IYU8 434 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 TMEM132CQ8N3T6 1108 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 OR2Y1Q8NGV0 311 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 OR10A6Q8NH74 314 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 TBC1D20Q96BZ9 403 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 OR1F2PQ96R84 312 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 THUMPD3Q9BV44 507 aaKnown RBP18.15■□□□□ 0.5
CCM2-216ENST00000488727 UGT2B28Q9BY64 529 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 LYRM4Q9HD34 91 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 LANCL2Q9NS86 450 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 FBXW2Q9UKT8 454 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 PTRH2Q9Y3E5 179 aaKnown RBP18.15■□□□□ 0.5
CCM2-216ENST00000488727 ATG4BQ9Y4P1 393 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 ASB4Q9Y574 426 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 CYR61O00622 381 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 GSTA4O15217 222 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 CLOCKO15516 846 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 DEAF1O75398 565 aaPredicted RBP18.15■□□□□ 0.5
CCM2-216ENST00000488727 CDC123O75794 336 aaPredicted RBP18.15■□□□□ 0.5
CCM2-216ENST00000488727 UMODP07911 640 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 FHP07954 510 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 TACR1P25103 407 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 PTPN6P29350 595 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 PLIN5Q00G26 463 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 CHRNB3Q05901 458 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 CCNYL2Q5T2Q4 361 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 FAM47BQ8NA70 645 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 TMEM52Q8NDY8 209 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 RNF145Q96MT1 663 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 TSSK3Q96PN8 268 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 SEPHS2Q99611 448 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 EBPLQ9BY08 206 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 FAM117AQ9C073 453 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 OLAHQ9NV23 265 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 C14orf105Q9NVL8 296 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 SIRT5Q9NXA8 310 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 NXT1Q9UKK6 140 aaKnown RBP18.15■□□□□ 0.5
CCM2-216ENST00000488727 MYRFQ9Y2G1 1151 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 PCDHB14Q9Y5E9 798 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 LAMA5O15230 3695 aa18.15■□□□□ 0.5
CCM2-216ENST00000488727 ACACBO00763 2458 aa18.14■□□□□ 0.5
CCM2-216ENST00000488727 ANKRD11Q6UB99 2663 aaPredicted RBP18.14■□□□□ 0.49
CCM2-216ENST00000488727 PLOD2O00469 737 aa18.14■□□□□ 0.49
CCM2-216ENST00000488727 EI24O14681 340 aa18.14■□□□□ 0.49
CCM2-216ENST00000488727 RRP8O43159 456 aaKnown RBP18.14■□□□□ 0.49
CCM2-216ENST00000488727 PRPS1L1P21108 318 aa18.14■□□□□ 0.49
CCM2-216ENST00000488727 TIA1P31483 386 aaKnown RBP eCLIP18.14■□□□□ 0.49
CCM2-216ENST00000488727 SOX11P35716 441 aa18.14■□□□□ 0.49
CCM2-216ENST00000488727 NR1H2P55055 460 aa18.14■□□□□ 0.49
CCM2-216ENST00000488727 GPR180Q86V85 440 aa18.14■□□□□ 0.49
CCM2-216ENST00000488727 STARD8Q92502 1023 aa18.14■□□□□ 0.49
CCM2-216ENST00000488727 RMND5BQ96G75 393 aaPredicted RBP18.14■□□□□ 0.49
CCM2-216ENST00000488727 CCNL2Q96S94 520 aaPredicted RBP18.14■□□□□ 0.49
CCM2-216ENST00000488727 TEX10Q9NXF1 929 aaPredicted RBP18.14■□□□□ 0.49
CCM2-216ENST00000488727 SMPD3Q9NY59 655 aaPredicted RBP18.14■□□□□ 0.49
CCM2-216ENST00000488727 PADI2Q9Y2J8 665 aa18.14■□□□□ 0.49
CCM2-216ENST00000488727 TPRP12270 2363 aaKnown RBP18.13■□□□□ 0.49
CCM2-216ENST00000488727 CXCR6O00574 342 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 PCDH7O60245 1069 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 PRKRAO75569 313 aaKnown RBP18.13■□□□□ 0.49
CCM2-216ENST00000488727 CD63P08962 238 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 ITPKBP27987 946 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 FOLR3P41439 243 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 TRPC1P48995 793 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 MAPK12P53778 367 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 TLE3Q04726 772 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 IL10RAQ13651 578 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 GTDC1Q4AE62 458 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 KCTD21Q4G0X4 260 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 DNAJC14Q6Y2X3 702 aaPredicted RBP18.13■□□□□ 0.49
CCM2-216ENST00000488727 MED25Q71SY5 747 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 METTL25Q8N6Q8 603 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 MESP1Q9BRJ9 268 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 VN1R1Q9GZP7 353 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 LYARQ9NX58 379 aaKnown RBP18.13■□□□□ 0.49
CCM2-216ENST00000488727 MKL2Q9ULH7 1088 aa18.13■□□□□ 0.49
CCM2-216ENST00000488727 PCSK5Q92824 1860 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 A0A1W2PR48 441 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 IDSB3KWA1 339 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 UPK1AO00322 258 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 PROM1O43490 865 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 B4GALT2O60909 372 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 CREG1O75629 220 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 RECKO95980 971 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 TUBA4AP68366 448 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 SRSF11Q05519 484 aaKnown RBP18.12■□□□□ 0.49
CCM2-216ENST00000488727 MINDY4Q4G0A6 757 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 NADK2Q4G0N4 442 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 C18orf63Q68DL7 685 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms