RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 ZNF175Q9Y473 711 aa2.55□□□□□ -2
CD46-215ENST00000488596 SYNJ2O15056 1496 aa2.54□□□□□ -2
CD46-215ENST00000488596 COL5A2P05997 1499 aaPredicted RBP2.54□□□□□ -2
CD46-215ENST00000488596 A0A0A6YYD4 124 aa2.54□□□□□ -2
CD46-215ENST00000488596 BCLAF3A2AJT9 711 aaKnown RBP2.54□□□□□ -2
CD46-215ENST00000488596 ARHGAP42A6NI28 874 aa2.54□□□□□ -2
CD46-215ENST00000488596 LRRTM2O43300 516 aa2.54□□□□□ -2
CD46-215ENST00000488596 RANBP6O60518 1105 aaKnown RBP2.54□□□□□ -2
CD46-215ENST00000488596 SEC22BO75396 215 aa2.54□□□□□ -2
CD46-215ENST00000488596 GAP43P17677 238 aa2.54□□□□□ -2
CD46-215ENST00000488596 BCL3P20749 454 aa2.54□□□□□ -2
CD46-215ENST00000488596 UCP1P25874 307 aa2.54□□□□□ -2
CD46-215ENST00000488596 PTPN4P29074 926 aa2.54□□□□□ -2
CD46-215ENST00000488596 PPP2R1BP30154 601 aa2.54□□□□□ -2
CD46-215ENST00000488596 SAA4P35542 130 aa2.54□□□□□ -2
CD46-215ENST00000488596 RABIFP47224 123 aa2.54□□□□□ -2
CD46-215ENST00000488596 SLC7A2P52569 658 aa2.54□□□□□ -2
CD46-215ENST00000488596 STARD6P59095 220 aa2.54□□□□□ -2
CD46-215ENST00000488596 CDC37Q16543 378 aaPredicted RBP2.54□□□□□ -2
CD46-215ENST00000488596 AGKQ53H12 422 aa2.54□□□□□ -2
CD46-215ENST00000488596 EIPR1Q53HC9 387 aa2.54□□□□□ -2
CD46-215ENST00000488596 REP15Q6BDI9 236 aa2.54□□□□□ -2
CD46-215ENST00000488596 APOOLQ6UXV4 268 aa2.54□□□□□ -2
CD46-215ENST00000488596 ADAMTSL5Q6ZMM2 481 aa2.54□□□□□ -2
CD46-215ENST00000488596 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
CD46-215ENST00000488596 TMUB2Q71RG4 321 aa2.54□□□□□ -2
CD46-215ENST00000488596 CEACAM19Q7Z692 300 aa2.54□□□□□ -2
CD46-215ENST00000488596 AMZ2Q86W34 360 aa2.54□□□□□ -2
CD46-215ENST00000488596 HIPK1Q86Z02 1210 aa2.54□□□□□ -2
CD46-215ENST00000488596 LRRC49Q8IUZ0 686 aa2.54□□□□□ -2
CD46-215ENST00000488596 ELMOD2Q8IZ81 293 aa2.54□□□□□ -2
CD46-215ENST00000488596 PYROXD2Q8N2H3 581 aa2.54□□□□□ -2
CD46-215ENST00000488596 OR6T1Q8NGN1 323 aa2.54□□□□□ -2
CD46-215ENST00000488596 ZNF671Q8TAW3 534 aa2.54□□□□□ -2
CD46-215ENST00000488596 BIRC7Q96CA5 298 aa2.54□□□□□ -2
CD46-215ENST00000488596 NSMCE2Q96MF7 247 aa2.54□□□□□ -2
CD46-215ENST00000488596 SPXQ9BT56 116 aa2.54□□□□□ -2
CD46-215ENST00000488596 APOOQ9BUR5 198 aa2.54□□□□□ -2
CD46-215ENST00000488596 ST6GALNAC5Q9BVH7 336 aa2.54□□□□□ -2
CD46-215ENST00000488596 NACA2Q9H009 215 aa2.54□□□□□ -2
CD46-215ENST00000488596 CNOT2Q9NZN8 540 aaKnown RBP2.54□□□□□ -2
CD46-215ENST00000488596 ARMCX1Q9P291 453 aa2.54□□□□□ -2
CD46-215ENST00000488596 MIOXQ9UGB7 285 aa2.54□□□□□ -2
CD46-215ENST00000488596 CCPG1Q9ULG6 757 aa2.54□□□□□ -2
CD46-215ENST00000488596 SLC9A8Q9Y2E8 581 aa2.54□□□□□ -2
CD46-215ENST00000488596 MRPL11Q9Y3B7 192 aaKnown RBP2.54□□□□□ -2
CD46-215ENST00000488596 CSAG2Q9Y5P2 127 aa2.54□□□□□ -2
CD46-215ENST00000488596 A0A0J9YVX5 310 aa2.53□□□□□ -2
CD46-215ENST00000488596 KRT87PA6NCN2 255 aa2.53□□□□□ -2
CD46-215ENST00000488596 ZNF840PA6NDX5 716 aa2.53□□□□□ -2
CD46-215ENST00000488596 CCT8L1PA6NM43 557 aa2.53□□□□□ -2
CD46-215ENST00000488596 FOXI3A8MTJ6 420 aaPredicted RBP2.53□□□□□ -2
CD46-215ENST00000488596 H3BMH7 237 aa2.53□□□□□ -2
CD46-215ENST00000488596 CYB561D2O14569 222 aa2.53□□□□□ -2
CD46-215ENST00000488596 EI24O14681 340 aa2.53□□□□□ -2
CD46-215ENST00000488596 MCF2LO15068 1137 aa2.53□□□□□ -2
CD46-215ENST00000488596 PTBP3O95758 552 aaKnown RBP2.53□□□□□ -2
CD46-215ENST00000488596 HPP00738 406 aa2.53□□□□□ -2
CD46-215ENST00000488596 MT-ATP6P00846 226 aa2.53□□□□□ -2
CD46-215ENST00000488596 TGFAP01135 160 aa2.53□□□□□ -2
CD46-215ENST00000488596 CXCL10P02778 98 aa2.53□□□□□ -2
CD46-215ENST00000488596 RPA1P27694 616 aa2.53□□□□□ -2
CD46-215ENST00000488596 TMOD1P28289 359 aa2.53□□□□□ -2
CD46-215ENST00000488596 MATKP42679 507 aa2.53□□□□□ -2
CD46-215ENST00000488596 SGSHP51688 502 aa2.53□□□□□ -2
CD46-215ENST00000488596 SLC8A3P57103 927 aa2.53□□□□□ -2
CD46-215ENST00000488596 HAND2P61296 217 aa2.53□□□□□ -2
CD46-215ENST00000488596 CRMP1Q14194 572 aa2.53□□□□□ -2
CD46-215ENST00000488596 KARSQ15046 597 aaKnown RBP2.53□□□□□ -2
CD46-215ENST00000488596 C17orf58Q2M2W7 97 aa2.53□□□□□ -2
CD46-215ENST00000488596 ACER2Q5QJU3 275 aa2.53□□□□□ -2
CD46-215ENST00000488596 LDLRAP1Q5SW96 308 aa2.53□□□□□ -2
CD46-215ENST00000488596 NEK5Q6P3R8 708 aa2.53□□□□□ -2
CD46-215ENST00000488596 ABRAXAS1Q6UWZ7 409 aa2.53□□□□□ -2
CD46-215ENST00000488596 CWC27Q6UX04 472 aaKnown RBP2.53□□□□□ -2
CD46-215ENST00000488596 DPY19L2P2Q6ZN68 376 aa2.53□□□□□ -2
CD46-215ENST00000488596 MOB2Q70IA6 237 aa2.53□□□□□ -2
CD46-215ENST00000488596 ZNF619Q8N2I2 560 aa2.53□□□□□ -2
CD46-215ENST00000488596 FGFRL1Q8N441 504 aa2.53□□□□□ -2
CD46-215ENST00000488596 MLKLQ8NB16 471 aa2.53□□□□□ -2
CD46-215ENST00000488596 OR4F17Q8NGA8 305 aa2.53□□□□□ -2
CD46-215ENST00000488596 OR52J3Q8NH60 311 aa2.53□□□□□ -2
CD46-215ENST00000488596 OR4F4Q96R69 305 aa2.53□□□□□ -2
CD46-215ENST00000488596 TTYH2Q9BSA4 534 aa2.53□□□□□ -2
CD46-215ENST00000488596 GPR174Q9BXC1 333 aa2.53□□□□□ -2
CD46-215ENST00000488596 FTHL17Q9BXU8 183 aa2.53□□□□□ -2
CD46-215ENST00000488596 PNNQ9H307 717 aaKnown RBP2.53□□□□□ -2
CD46-215ENST00000488596 ALG9Q9H6U8 611 aa2.53□□□□□ -2
CD46-215ENST00000488596 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.53□□□□□ -2
CD46-215ENST00000488596 IL20RAQ9UHF4 553 aa2.53□□□□□ -2
CD46-215ENST00000488596 EMCNQ9ULC0 261 aa2.53□□□□□ -2
CD46-215ENST00000488596 RNF24Q9Y225 148 aa2.53□□□□□ -2
CD46-215ENST00000488596 A0A087WWV3 80 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 E9PAM4 449 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 SAP18O00422 153 aaKnown RBP2.52□□□□□ -2.01
CD46-215ENST00000488596 CFLARO15519 480 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 GPRIN2O60269 458 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 SRPX2O60687 465 aaPredicted RBP2.52□□□□□ -2.01
CD46-215ENST00000488596 SH3BGRLO75368 114 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 ECDO95905 644 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms