RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 A0A1W2PS29 197 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 TMEM247A6NEH6 219 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 PLOD2O00469 737 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 CHST10O43529 356 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 CSO75390 466 aaKnown RBP11.92□□□□□ -0.5
NELFE-209ENST00000488426 GPR75O95800 540 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 MT-ND1P03886 318 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 SEMG1P04279 462 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 GP1BAP07359 652 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 CPMP14384 443 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 PORP16435 677 aaPredicted RBP11.92□□□□□ -0.5
NELFE-209ENST00000488426 ITPKBP27987 946 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 AVPR1BP47901 424 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 RPS6KA3P51812 740 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 PDX1P52945 283 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 RPS26P62854 115 aaKnown RBP11.92□□□□□ -0.5
NELFE-209ENST00000488426 MYBPC3Q14896 1274 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 RTP5Q14D33 572 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 CYBRD1Q53TN4 286 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 CRB2Q5IJ48 1285 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 REEP3Q6NUK4 255 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 PPP4R4Q6NUP7 873 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 TNFAIP8L2Q6P589 184 aaPredicted RBP11.92□□□□□ -0.5
NELFE-209ENST00000488426 TMEM107Q6UX40 140 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 ZBTB49Q6ZSB9 765 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 SZRD1Q7Z422 152 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 PATL1Q86TB9 770 aaKnown RBP11.92□□□□□ -0.5
NELFE-209ENST00000488426 ZC3H7AQ8IWR0 971 aaKnown RBP11.92□□□□□ -0.5
NELFE-209ENST00000488426 OR9A2Q8NGT5 310 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 ZNF768Q9H5H4 540 aaKnown RBP11.92□□□□□ -0.5
NELFE-209ENST00000488426 COQ10BQ9H8M1 238 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 PTGFRNQ9P2B2 879 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 P2RX2Q9UBL9 471 aa11.92□□□□□ -0.5
NELFE-209ENST00000488426 MRPS33Q9Y291 106 aaKnown RBP11.92□□□□□ -0.5
NELFE-209ENST00000488426 A0A0A6YYC8 382 aaPredicted RBP11.91□□□□□ -0.5
NELFE-209ENST00000488426 A0A1W2PQM1 296 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 SAC3D1A6NKF1 404 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 C5orf58C9J3I9 102 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 H0YIG0 161 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 I3L1I5 382 aaPredicted RBP11.91□□□□□ -0.5
NELFE-209ENST00000488426 AGRPO00253 132 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 HMGN4O00479 90 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 SUV39H1O43463 412 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 BRINP1O60477 761 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 GCM2O75603 506 aaPredicted RBP11.91□□□□□ -0.5
NELFE-209ENST00000488426 MED26O95402 600 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 ATP1B1P05026 303 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 NELFEP18615 380 aaKnown RBP11.91□□□□□ -0.5
NELFE-209ENST00000488426 MATN1P21941 496 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 MC3RP41968 323 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 DUSP3P51452 185 aaPredicted RBP11.91□□□□□ -0.5
NELFE-209ENST00000488426 CRYBA2P53672 197 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 FOLH1Q04609 750 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 GPR19Q15760 415 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 COL28A1Q2UY09 1125 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 FAM214AQ32MH5 1076 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 TMEM71Q6P5X7 295 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 EPHX4Q8IUS5 362 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 LZICQ8WZA0 190 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 MVB12AQ96EY5 273 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 HSH2DQ96JZ2 352 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 DPYSL5Q9BPU6 564 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 OR51I1Q9H343 314 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 SERHL2Q9H4I8 314 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 IL1RAPQ9NPH3 570 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 TMEM9Q9P0T7 183 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 ZNF639Q9UID6 485 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 OAZ3Q9UMX2 235 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 IGSF10Q6WRI0 2623 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 H3BMH7 237 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 ASNA1O43681 348 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 FGF17O60258 216 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 OR2B3O76000 313 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 PDE9AO76083 593 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 BMP10O95393 424 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 CST1P01037 141 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 HMGN2P05204 90 aaKnown RBP11.91□□□□□ -0.5
NELFE-209ENST00000488426 TFPTP0C1Z6 253 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 UQCRBP14927 111 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 AQP1P29972 269 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 SEPHS1P49903 392 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 CLCN2P51788 898 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 SELENOWP63302 87 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 ATMQ13315 3056 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 GNA13Q14344 377 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 ISXQ2M1V0 245 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 B3GNT8Q7Z7M8 397 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 GALNT10Q86SR1 603 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 ZDHHC21Q8IVQ6 265 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 LGI4Q8N135 537 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 CACTIN-AS1Q8N1I8 211 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 GALNT4Q8N4A0 578 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 TMEM52Q8NDY8 209 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 NUP43Q8NFH3 380 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 SLC38A5Q8WUX1 472 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 VPS50Q96JG6 964 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 ZNF597Q96LX8 424 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 DCBLD2Q96PD2 775 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 MS4A4EQ96PG1 132 aa11.91□□□□□ -0.5
NELFE-209ENST00000488426 NUDT22Q9BRQ3 303 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms