RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 RAET1GQ6H3X3 334 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 KIAA1161Q6NSJ0 714 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 CHMP1BQ7LBR1 199 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 DEFB128Q7Z7B8 93 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 LRRC17Q8N6Y2 441 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 DNAJA4Q8WW22 397 aaPredicted RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 UFD1Q92890 307 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 SPNS1Q9H2V7 528 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 MIEF1Q9NQG6 463 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 SRRDQ9UH36 339 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 ENOPH1Q9UHY7 261 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 SF3B6Q9Y3B4 125 aaKnown RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 CFDP00746 253 aaPredicted RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 TP53P04637 393 aaPredicted RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 CBSLP0DN79 551 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 ATP1B2P14415 290 aaPredicted RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 MMP11P24347 488 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 CBSP35520 551 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 GIPRP48546 466 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 PCBP3P57721 371 aaKnown RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 RGS1Q08116 209 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 FAM27D1Q5T7N8 215 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 C12orf73Q69YU5 71 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 REEP3Q6NUK4 255 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 PODNL1Q6PEZ8 512 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 TMEM91Q6ZNR0 172 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 TMCO2Q7Z6W1 182 aaPredicted RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 ZER1Q7Z7L7 766 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 NPAS4Q8IUM7 802 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 VN1R3Q9BXE9 311 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 KCNK12Q9HB15 430 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 STOX2Q9P2F5 926 aaPredicted RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 ATP6V1HQ9UI12 483 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 PIPSLA2A3N6 862 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 H3BUI4 141 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 PDPK1O15530 556 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 SLC43A1O75387 559 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 FURINP09958 794 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 VSX2P58304 361 aaPredicted RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 AP1S1P61966 158 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 ZMYND11Q15326 602 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 ZNF630Q2M218 657 aaPredicted RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 NR2C2APQ86WQ0 139 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 TBX5Q99593 518 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 ZDHHC6Q9H6R6 413 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 ZFP64Q9NPA5 681 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 TRPM5Q9NZQ8 1165 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 ING4Q9UNL4 249 aa13.42□□□□□ -0.26
COL16A1-214ENST00000488128 DIMT1Q9UNQ2 313 aaKnown RBP13.42□□□□□ -0.26
COL16A1-214ENST00000488128 TET1Q8NFU7 2136 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 ANHXE9PGG2 379 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 ARAFP10398 606 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 WASH2PQ6VEQ5 465 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 QSOX2Q6ZRP7 698 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 OR5D16Q8NGK9 328 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 TMEM163Q8TC26 289 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 NKIRAS2Q9NYR9 191 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 GULP1Q9UBP9 304 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 FBXW2Q9UKT8 454 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 ZFR2Q9UPR6 939 aaKnown RBP13.41□□□□□ -0.26
COL16A1-214ENST00000488128 ATP6V1G2-DDX39BF2Z307 99 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 FRS3O43559 492 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 PQBP1O60828 265 aaKnown RBP13.41□□□□□ -0.26
COL16A1-214ENST00000488128 GPR37L1O60883 481 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 INHAP05111 366 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 IRS1P35568 1242 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 ATP6V1E1P36543 226 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 DGKGP49619 791 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 EPHA5P54756 1037 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 DCDC1P59894 354 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 EXOSC2Q13868 293 aaKnown RBP13.41□□□□□ -0.26
COL16A1-214ENST00000488128 SLBPQ14493 270 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL16A1-214ENST00000488128 SUZ12Q15022 739 aaKnown RBP13.41□□□□□ -0.26
COL16A1-214ENST00000488128 SF3A2Q15428 464 aaKnown RBP13.41□□□□□ -0.26
COL16A1-214ENST00000488128 ZSWIM7Q19AV6 140 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 LYPLAL1Q5VWZ2 237 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 SLC51BQ86UW2 128 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 OR4K5Q8NGD3 323 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 C16orf78Q8WTQ4 265 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 AUTS2Q8WXX7 1259 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 NACC2Q96BF6 587 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 YIPF4Q9BSR8 244 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 TMEM38AQ9H6F2 299 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 CNIH4Q9P003 139 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 SEC14L3Q9UDX4 400 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 PCDHGB7Q9Y5F8 929 aa13.41□□□□□ -0.26
COL16A1-214ENST00000488128 SCN8AQ9UQD0 1980 aa13.4□□□□□ -0.26
COL16A1-214ENST00000488128 FRMPD3Q5JV73 1810 aa13.4□□□□□ -0.26
COL16A1-214ENST00000488128 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
COL16A1-214ENST00000488128 TSPAN6O43657 245 aa13.4□□□□□ -0.26
COL16A1-214ENST00000488128 SOD1P00441 154 aa13.4□□□□□ -0.26
COL16A1-214ENST00000488128 LIMS3P0CW19 117 aa13.4□□□□□ -0.26
COL16A1-214ENST00000488128 LIMS4P0CW20 117 aa13.4□□□□□ -0.26
COL16A1-214ENST00000488128 XPAP23025 273 aaPredicted RBP13.4□□□□□ -0.26
COL16A1-214ENST00000488128 IMPA1P29218 277 aa13.4□□□□□ -0.26
COL16A1-214ENST00000488128 CRYZQ08257 329 aaKnown RBP13.4□□□□□ -0.26
COL16A1-214ENST00000488128 ELAVL2Q12926 359 aaKnown RBP13.4□□□□□ -0.26
COL16A1-214ENST00000488128 BTN1A1Q13410 526 aa13.4□□□□□ -0.26
COL16A1-214ENST00000488128 SYPL1Q16563 259 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms