RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 AMD1P17707 334 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 NMT1P30419 496 aaKnown RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 MAGEA8P43361 318 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 TPMTP51580 245 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 SRYQ05066 204 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 SPAG1Q07617 926 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 MFGE8Q08431 387 aaPredicted RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 DNAJC3Q13217 504 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 PARP6Q2NL67 630 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 MANEAQ5SRI9 462 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 DCAF12Q5T6F0 453 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 TTC19Q6DKK2 380 aaPredicted RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 TMEM225Q6GV28 225 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 KIAA1161Q6NSJ0 714 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 TRNP1Q6NT89 227 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 FAM122CQ6P4D5 195 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 UQCC3Q6UW78 93 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 Q7L0L9 218 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 ITIH5Q86UX2 942 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 CACUL1Q86Y37 369 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 DCP1BQ8IZD4 617 aaKnown RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 TEX26Q8N6G2 289 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 RBMXL3Q8N7X1 1067 aaKnown RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 OR2T12Q8NG77 320 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 NANPQ8TBE9 248 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 C17orf77Q96MU5 243 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 OR1F2PQ96R84 312 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 OMDQ99983 421 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 STRADBQ9C0K7 418 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 XKR8Q9H6D3 395 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 ANKRA2Q9H9E1 313 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 UBTD1Q9HAC8 227 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 LRRC4Q9HBW1 653 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 UFSP2Q9NUQ7 469 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 POT1Q9NUX5 634 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 SMOXQ9NWM0 555 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 ZNF224Q9NZL3 707 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 PIPOXQ9P0Z9 390 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 RALYQ9UKM9 306 aaKnown RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 GSTK1Q9Y2Q3 226 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 SPATA31D1Q6ZQQ2 1576 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 RNF123Q5XPI4 1314 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 TRBV4-1A0A0J9YWV2 114 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 RPS10-NUDT3A0A1W2PQS6 291 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 SNTNA6NMZ2 147 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 TCP11X1B4DZS4 312 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 SUPT3HB4E1H0 165 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 GOLGA8SH3BPF8 625 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 IMPA2O14732 288 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 TNFRSF13BO14836 293 aaPredicted RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 NBR2O15453 112 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 RNF113AO15541 343 aaKnown RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 XPNPEP2O43895 674 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 CDH16O75309 829 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 UPK3AO75631 287 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 NXPH2O95156 264 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 FCGR1AP12314 374 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 CTNNA2P26232 953 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 CCKARP32238 428 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 NF2P35240 595 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 FDFT1P37268 417 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 CDKN1BP46527 198 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 SGSHP51688 502 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 OR1D5P58170 312 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 HERVK_113P63132 956 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 ERVK-8P63133 956 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 RPL24P83731 157 aaKnown RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 IL18Q14116 193 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 CHI3L2Q15782 390 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 C3AR1Q16581 482 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 ACSF3Q4G176 576 aaPredicted RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 ASPRV1Q53RT3 343 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 FBXO48Q5FWF7 155 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 SPANXN2Q5MJ10 180 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 TCHHL1Q5QJ38 904 aaPredicted RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 PDZK1Q5T2W1 519 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 CWC27Q6UX04 472 aaKnown RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 P4HA3Q7Z4N8 544 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 PIM3Q86V86 326 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 FJX1Q86VR8 437 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 PLD3Q8IV08 490 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 KATNAL2Q8IYT4 538 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 OR5AU1Q8NGC0 362 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 KCNG3Q8TAE7 436 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 FAM3CQ92520 227 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 ISG20Q96AZ6 181 aaKnown RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 TMIGD2Q96BF3 282 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 C11orf24Q96F05 449 aaPredicted RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 SH3YL1Q96HL8 342 aaPredicted RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 AKR1E2Q96JD6 320 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 ANKRD27Q96NW4 1050 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 CHP1Q99653 195 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 ERVK-6Q9BXR3 956 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 CYP3A43Q9HB55 503 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 SLC25A19Q9HC21 320 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 C2orf42Q9NWW7 574 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 PDP1Q9P0J1 537 aaPredicted RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 THEGQ9P2T0 379 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 POLKQ9UBT6 870 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 FBXL4Q9UKA2 621 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms