RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 PGDP52209 483 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 RBBP4Q09028 425 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 MGAT2Q10469 447 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 ZNF267Q14586 743 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-242ENST00000488013 ZNF750Q32MQ0 723 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 ATAD3BQ5T9A4 648 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 FAM180BQ6P0A1 224 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 PAPD4Q6PIY7 484 aaKnown RBP10.3□□□□□ -0.76
HDLBP-242ENST00000488013 ANGPTL8Q6UXH0 198 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 DNAJC14Q6Y2X3 702 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-242ENST00000488013 SHISA6Q6ZSJ9 500 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 ZNF771Q7L3S4 317 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-242ENST00000488013 SZRD1Q7Z422 152 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 NUP43Q8NFH3 380 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 B3GNT7Q8NFL0 401 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 OR1N1Q8NGS0 311 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 NUDT8Q8WV74 236 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 THAP4Q8WY91 577 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 PPWD1Q96BP3 646 aaKnown RBP10.3□□□□□ -0.76
HDLBP-242ENST00000488013 SLC7A6OSQ96CW6 309 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-242ENST00000488013 VMP1Q96GC9 406 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 FER1L6-AS2Q96M78 137 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 RAB3IPQ96QF0 476 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-242ENST00000488013 STACQ99469 402 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 CNPPD1Q9BV87 410 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 ACTRT3Q9BYD9 372 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 CXorf36Q9H7Y0 433 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 EXD2Q9NVH0 621 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 SLC25A37Q9NYZ2 338 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 ADA2Q9NZK5 511 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 SLAMF8Q9P0V8 285 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 TMEM181Q9P2C4 612 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 ABCD2Q9UBJ2 740 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 BCAP29Q9UHQ4 241 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 MRTO4Q9UKD2 239 aaKnown RBP10.3□□□□□ -0.76
HDLBP-242ENST00000488013 LIPT1Q9Y234 373 aa10.3□□□□□ -0.76
HDLBP-242ENST00000488013 SNRNP200O75643 2136 aaKnown RBP10.3□□□□□ -0.76
HDLBP-242ENST00000488013 SEC16AO15027 2179 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 NSG1A0A0A6YYJ2 146 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 CFAP73A6NFT4 308 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 TGFBR3LH3BV60 316 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 CDK2AP1O14519 115 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 PSMG1O95456 288 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 HPP00738 406 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 IGKV3-11P04433 115 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 GSNP06396 782 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 BMP2P12643 396 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 CD1EP15812 388 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 HOXB9P17482 250 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-242ENST00000488013 EFNA1P20827 205 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-242ENST00000488013 CLCN2P51788 898 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 SLC7A2P52569 658 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 SLC25A3Q00325 362 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 GAB1Q13480 694 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 CAPRIN1Q14444 709 aaKnown RBP10.29□□□□□ -0.76
HDLBP-242ENST00000488013 RGNQ15493 299 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 FHL5Q5TD97 284 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 HLA-DQA1Q5Y7H0 255 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 PLAG1Q6DJT9 500 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 HSDL2Q6YN16 418 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 RNF111Q6ZNA4 994 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 RINLQ6ZS11 566 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 ASRGL1Q7L266 308 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 SLC29A4Q7RTT9 530 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 MARCH9Q86YJ5 346 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 SLC15A3Q8IY34 581 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 C10orf67Q8IYJ2 551 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 ADCY4Q8NFM4 1077 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 OR7G2Q8NG99 324 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 OR52R1Q8NGF1 315 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 SNIP1Q8TAD8 396 aaKnown RBP10.29□□□□□ -0.76
HDLBP-242ENST00000488013 M1APQ8TC57 530 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 SLC2A12Q8TD20 617 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 KAT2AQ92830 837 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 PMM1Q92871 262 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 REXO5Q96IC2 774 aaKnown RBP10.29□□□□□ -0.76
HDLBP-242ENST00000488013 SLC35G5Q96KT7 338 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 CDRT15Q96T59 188 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 CPPED1Q9BRF8 314 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-242ENST00000488013 OR8D2Q9GZM6 311 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 OR10A5Q9H207 317 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 MUC13Q9H3R2 512 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 EPS8L2Q9H6S3 715 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 KAT8Q9H7Z6 458 aaKnown RBP10.29□□□□□ -0.76
HDLBP-242ENST00000488013 DUSP22Q9NRW4 184 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 CALML5Q9NZT1 146 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 HS3ST3B1Q9Y662 390 aa10.29□□□□□ -0.76
HDLBP-242ENST00000488013 MDC1Q14676 2089 aaKnown RBP10.29□□□□□ -0.76
HDLBP-242ENST00000488013 IGHV1-45A0A0A0MS14 117 aa10.28□□□□□ -0.76
HDLBP-242ENST00000488013 LOC101059948A0A1B0GTJ6 334 aa10.28□□□□□ -0.76
HDLBP-242ENST00000488013 OR2W5A6NFC9 320 aa10.28□□□□□ -0.76
HDLBP-242ENST00000488013 ACOX3O15254 700 aa10.28□□□□□ -0.76
HDLBP-242ENST00000488013 GSC2O15499 205 aa10.28□□□□□ -0.76
HDLBP-242ENST00000488013 ZFAND5O76080 213 aa10.28□□□□□ -0.76
HDLBP-242ENST00000488013 DDAH2O95865 285 aa10.28□□□□□ -0.76
HDLBP-242ENST00000488013 CBX7O95931 251 aa10.28□□□□□ -0.76
HDLBP-242ENST00000488013 HMGN2P05204 90 aaKnown RBP10.28□□□□□ -0.76
HDLBP-242ENST00000488013 GUSBP08236 651 aa10.28□□□□□ -0.76
HDLBP-242ENST00000488013 ALOX5P09917 674 aa10.28□□□□□ -0.76
HDLBP-242ENST00000488013 HSD17B1P14061 328 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms