RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PDE10AQ9Y233 779 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 TYROBPO43914 113 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 NUDT17P0C025 328 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 HAND2P61296 217 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 ZNF85Q03923 595 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 CD226Q15762 336 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 CAVIN1Q6NZI2 390 aaKnown RBP2.33□□□□□ -2.04
SMC4-219ENST00000487747 TFAP2EQ6VUC0 442 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 GPR142Q7Z601 462 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 SLFN11Q7Z7L1 901 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 ASPGQ86U10 573 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 LUZP1Q86V48 1076 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 THEM5Q8N1Q8 247 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 ZNF540Q8NDQ6 660 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 RFESDQ8TAC1 157 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 UBLCP1Q8WVY7 318 aaPredicted RBP2.33□□□□□ -2.04
SMC4-219ENST00000487747 GGHQ92820 318 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 DHTKD1Q96HY7 919 aaPredicted RBP2.33□□□□□ -2.04
SMC4-219ENST00000487747 CXorf58Q96LI9 332 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 RAB3IPQ96QF0 476 aaPredicted RBP2.33□□□□□ -2.04
SMC4-219ENST00000487747 C19orf43Q9BQ61 176 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 AFF2P51816 1311 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 KIF7Q2M1P5 1343 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
SMC4-219ENST00000487747 ANKRD63C9JTQ0 380 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 LCMT2O60294 686 aaKnown RBP2.32□□□□□ -2.04
SMC4-219ENST00000487747 ATP9AO75110 1047 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 NOL4O94818 638 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 FCER2P06734 321 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 SAA4P35542 130 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 SOAT1P35610 550 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 VCPP55072 806 aaKnown RBP2.32□□□□□ -2.04
SMC4-219ENST00000487747 SLC34A1Q06495 639 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 ARHGAP1Q07960 439 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 HSPA14Q0VDF9 509 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 TCHHL1Q5QJ38 904 aaPredicted RBP2.32□□□□□ -2.04
SMC4-219ENST00000487747 KLHDC8AQ8IYD2 350 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 LINC00518Q8N0U6 118 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 SIX6OS1Q8N1H7 587 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 OR4L1Q8NH43 312 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 FBXO30Q8TB52 745 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 CORO2AQ92828 525 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 ULK4Q96C45 1275 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 COG3Q96JB2 828 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 POLR3GLQ9BT43 218 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 HCAR1Q9BXC0 346 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 CCSER1Q9C0I3 900 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 ZDHHC6Q9H6R6 413 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 CENPMQ9NSP4 180 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 ERVK-19Q9WJR5 959 aa2.32□□□□□ -2.04
SMC4-219ENST00000487747 IGKV2D-24A0A075B6R9 120 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 SLC30A4O14863 429 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 EIF5BO60841 1220 aaKnown RBP2.31□□□□□ -2.04
SMC4-219ENST00000487747 TXNDC12O95881 172 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 TPBGLP0DKB5 382 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 MBL2P11226 248 aaPredicted RBP2.31□□□□□ -2.04
SMC4-219ENST00000487747 AXLP30530 894 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 TNFSF10P50591 281 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 ORC2Q13416 577 aaPredicted RBP2.31□□□□□ -2.04
SMC4-219ENST00000487747 MPPED2Q15777 294 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 TMEM179BQ7Z7N9 219 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 H1FOOQ8IZA3 346 aaPredicted RBP2.31□□□□□ -2.04
SMC4-219ENST00000487747 NHLRC2Q8NBF2 726 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 OR10H4Q8NGA5 316 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 OPN3Q9H1Y3 402 aaPredicted RBP2.31□□□□□ -2.04
SMC4-219ENST00000487747 Q9H3A6 140 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 NANOGQ9H9S0 305 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 NRN1Q9NPD7 142 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 PRG3Q9Y2Y8 225 aaPredicted RBP2.31□□□□□ -2.04
SMC4-219ENST00000487747 GAKO14976 1311 aa2.31□□□□□ -2.04
SMC4-219ENST00000487747 TRAV34A0A0B4J273 112 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 A0A0U1RQK1 487 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 SNAI2O43623 268 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 GPX5O75715 221 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 RAD51DO75771 328 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 HPNP05981 417 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 POU3F4P49335 361 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 SLC12A3P55017 1021 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 RPS4XP62701 263 aaKnown RBP2.3□□□□□ -2.04
SMC4-219ENST00000487747 KLF5Q13887 457 aaPredicted RBP2.3□□□□□ -2.04
SMC4-219ENST00000487747 ZIC1Q15915 447 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 Q7L0L9 218 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 PIWIL3Q7Z3Z3 882 aaKnown RBP2.3□□□□□ -2.04
SMC4-219ENST00000487747 PARK7Q99497 189 aaKnown RBP2.3□□□□□ -2.04
SMC4-219ENST00000487747 NTMT1Q9BV86 223 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 TSSK1BQ9BXA7 367 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 DCTPP1Q9H773 170 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 TUBGCP4Q9UGJ1 667 aa2.3□□□□□ -2.04
SMC4-219ENST00000487747 MRTO4Q9UKD2 239 aaKnown RBP2.3□□□□□ -2.04
SMC4-219ENST00000487747 CYB561D2O14569 222 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 OR7A17O14581 309 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 PDE5AO76074 875 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 CHRNGP07510 517 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 CT45A8P0DMV1 189 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 CT45A9P0DMV2 189 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 UGT1A3P35503 534 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 GIT2Q14161 759 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 KRT31Q15323 416 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 ZNF630Q2M218 657 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms