RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PRAMEF7Q5VXH5 474 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 MED25Q71SY5 747 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 ARHGAP22Q7Z5H3 698 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 SLC44A2Q8IWA5 706 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 CHERPQ8IWX8 916 aaKnown RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 MARVELD2Q8N4S9 558 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 OR4D9Q8NGE8 314 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 BBS10Q8TAM1 723 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 XAGE5Q8WWM1 108 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 OTUB1Q96FW1 271 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 PEX11GQ96HA9 241 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 NR1H4Q96RI1 486 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 YIPF4Q9BSR8 244 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 RBCK1Q9BYM8 510 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 Q9H521 79 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 EQTNQ9NQ60 294 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 RAB23Q9ULC3 237 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 ATXN7L1Q9ULK2 861 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 MAGED1Q9Y5V3 778 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 GPC6Q9Y625 555 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 KCNE3Q9Y6H6 103 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 DSPPQ9NZW4 1301 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 A8MU76 341 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 G3V2T6 193 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 ZNF749O43361 778 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 HYAL3O43820 417 aaPredicted RBP8.83□□□□□ -1
SF3B1-211ENST00000487698 CTNSO60931 367 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 HPRP00739 348 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 CHRM4P08173 479 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 CT62P0C5K7 136 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 NR2F1P10589 423 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 MPLP40238 635 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 ALDH3A2P51648 485 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 MAPK10P53779 464 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 CRISP3P54108 245 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 PPP2R2BQ00005 443 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 DAG1Q14118 895 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 DUSP7Q16829 419 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 YOD1Q5VVQ6 348 aaPredicted RBP8.83□□□□□ -1
SF3B1-211ENST00000487698 HEPHL1Q6MZM0 1159 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 CDC73Q6P1J9 531 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 SHQ1Q6PI26 577 aaKnown RBP8.83□□□□□ -1
SF3B1-211ENST00000487698 DGAT2L6Q6ZPD8 337 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 TTLL10Q6ZVT0 673 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 ZDHHC13Q8IUH4 622 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 METTL27Q8N6F8 245 aaPredicted RBP8.83□□□□□ -1
SF3B1-211ENST00000487698 GPR32P1Q8NGA4 272 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 OR5K1Q8NHB7 308 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 GEMIN6Q8WXD5 167 aaKnown RBP8.83□□□□□ -1
SF3B1-211ENST00000487698 GATA6Q92908 595 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 LOXL4Q96JB6 756 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 BTBD2Q9BX70 525 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 GABARAPL1Q9H0R8 117 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 LRRN3Q9H3W5 708 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 FGF21Q9NSA1 209 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 USE1Q9NZ43 259 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 NDUFAF4Q9P032 175 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 GMEB2Q9UKD1 530 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 CACNA1HO95180 2353 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 WDR87Q6ZQQ6 2873 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 MYOCOSA0A1B0GUC4 107 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 GNGT2O14610 69 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 NME6O75414 186 aaPredicted RBP8.83□□□□□ -1
SF3B1-211ENST00000487698 DIRAS1O95057 198 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 ZNF883P0CG24 379 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 ETS2P15036 469 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 TNFRSF1BP20333 461 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 MAP3K8P41279 467 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 XCR1P46094 333 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 HSD17B7P56937 341 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 SLC13A2Q13183 592 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 GNA13Q14344 377 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 STK32CQ86UX6 486 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 CARM1Q86X55 608 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 GPR135Q8IZ08 494 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 ST13P4Q8IZP2 240 aaPredicted RBP8.83□□□□□ -1
SF3B1-211ENST00000487698 HS3ST5Q8IZT8 346 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 SMYD1Q8NB12 490 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 SLC16A11Q8NCK7 471 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 OR51Q1Q8NH59 317 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 SPPL2AQ8TCT8 520 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 MAGEE2Q8TD90 523 aaPredicted RBP8.83□□□□□ -1
SF3B1-211ENST00000487698 TFAP2CQ92754 450 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 HOXB13Q92826 284 aaPredicted RBP8.83□□□□□ -1
SF3B1-211ENST00000487698 SLC35A4Q96G79 324 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 TRNT1Q96Q11 434 aaKnown RBP8.83□□□□□ -1
SF3B1-211ENST00000487698 ZNF607Q96SK3 696 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 DPYSL5Q9BPU6 564 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 OSBPL10Q9BXB5 764 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 SMOC1Q9H4F8 434 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 CXorf21Q9HAI6 301 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 PRTFDC1Q9NRG1 225 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 LANCL2Q9NS86 450 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 GIN1Q9NXP7 522 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 SMPD3Q9NY59 655 aaPredicted RBP8.83□□□□□ -1
SF3B1-211ENST00000487698 LIPT1Q9Y234 373 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 PCDHGA5Q9Y5G8 931 aa8.83□□□□□ -1
SF3B1-211ENST00000487698 A0A0G2JPF8 293 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 IGHV5-10-1A0A0J9YXX1 117 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 DUXAA6NLW8 204 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms