RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 SLC12A4Q9UP95 1085 aa3.75□□□□□ -1.81
SNRNP40-205ENST00000486941 PLCL2Q9UPR0 1127 aa3.75□□□□□ -1.81
SNRNP40-205ENST00000486941 ENTPD4Q9Y227 616 aa3.75□□□□□ -1.81
SNRNP40-205ENST00000486941 NTNG1Q9Y2I2 539 aa3.75□□□□□ -1.81
SNRNP40-205ENST00000486941 AAR2Q9Y312 384 aaKnown RBP3.75□□□□□ -1.81
SNRNP40-205ENST00000486941 ALG6Q9Y672 507 aa3.75□□□□□ -1.81
SNRNP40-205ENST00000486941 SPG11Q96JI7 2443 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 NAV3Q8IVL0 2385 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 MTORP42345 2549 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 PDZD2O15018 2839 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 A0A0J9YY10 115 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 A0A1B0GUH1 482 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 HEATR9A2RTY3 570 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 GOLGA6L19H0YKK7 550 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 H7C0C1 242 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 APOC4-APOC2K7ER74 178 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 E2F3O00716 465 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 ZNF189O75820 626 aaPredicted RBP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 AP2A1O95782 977 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 APOC2P02655 101 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 STSP08842 583 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 TPM1P09493 284 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 TPBGLP0DKB5 382 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 FCGR1AP12314 374 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 UGT2B7P16662 529 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 PSMA3P25788 255 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 ANP32AP39687 249 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 NSG1P42857 185 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 ATP5OP48047 213 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 HADHBP55084 474 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 CACNG1Q06432 222 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 TRIM14Q14142 442 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 CSHL1Q14406 222 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 PRPSAP1Q14558 356 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 ITIH4Q14624 930 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 KIR2DS3Q14952 304 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 ZNF718Q3SXZ3 478 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 ANKRD20A2Q5SQ80 823 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 ANKRD20A1Q5TYW2 823 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 C1orf189Q5VU69 101 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 ANKRD20A3Q5VUR7 823 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 IRAK1BP1Q5VVH5 260 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 CAVIN1Q6NZI2 390 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 RPUSD3Q6P087 351 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 ISLR2Q6UXK2 745 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 BBS12Q6ZW61 710 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 TAS2R42Q7RTR8 314 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 SERPINA9Q86WD7 417 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 TMTC1Q8IUR5 882 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 KLHDC8BQ8IXV7 354 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 TBC1D21Q8IYX1 336 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 CPAMD8Q8IZJ3 1885 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 CLDN19Q8N6F1 224 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 OR5AR1Q8NGP9 310 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 OR13C4Q8NGS5 318 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 OR5K2Q8NHB8 316 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 GRHL3Q8TE85 626 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 LRRC45Q96CN5 670 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 CDKN2AIPNLQ96HQ2 116 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 CHP1Q99653 195 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 NRTNQ99748 197 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 APOL2Q9BQE5 337 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 HGH1Q9BTY7 390 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 SORBS1Q9BX66 1292 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 LHPPQ9H008 270 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 NHEJ1Q9H9Q4 299 aaPredicted RBP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 MRM3Q9HC36 420 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 SDF2L1Q9HCN8 221 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 SLC22A11Q9NSA0 550 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 NLE1Q9NVX2 485 aaPredicted RBP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 SPHK1Q9NYA1 384 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 EURLQ9NYK6 297 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 IL1RAPL1Q9NZN1 696 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 DHCR7Q9UBM7 475 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 FBXL4Q9UKA2 621 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 OSGIN2Q9Y236 505 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 ASF1AQ9Y294 204 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 HYOU1Q9Y4L1 999 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 HIVEP1P15822 2718 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 NCOA6Q14686 2063 aaPredicted RBP3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 OTOGQ6ZRI0 2925 aa3.74□□□□□ -1.81
SNRNP40-205ENST00000486941 ITPR3Q14573 2671 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 FBN2P35556 2912 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 A0A1B0GX78 115 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 TCRBV7S3A2A0A539 114 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 SLC5A10A0PJK1 596 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ARHGAP10A1A4S6 786 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 VSTM2BA6NLU5 285 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 MCIDASD6RGH6 385 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 CCL22O00626 93 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 SOCS6O14544 535 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 LIASO43766 372 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 SRPX2O60687 465 aaPredicted RBP3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ZG16O60844 167 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 JRKO75564 520 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 FTH1P02794 183 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 LCKP06239 509 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ITGAXP20702 1163 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 MAGP20916 626 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms