RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PGBD3Q8N328 593 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 OXR1Q8N573 874 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 FAM46AQ96IP4 442 aaKnown RBP11.71□□□□□ -0.53
HSPG2-211ENST00000486901 MAGEB10Q96LZ2 347 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-211ENST00000486901 CHIAQ9BZP6 476 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 EXTL2Q9UBQ6 330 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 FBXW2Q9UKT8 454 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 PRUNE2Q8WUY3 3088 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 KPNA3O00505 521 aaPredicted RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 MRPL3P09001 348 aaKnown RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 CBSLP0DN79 551 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 CBSP35520 551 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 GIPRP48546 466 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 ASAH1Q13510 395 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 MLIPQ5VWP3 458 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 LYPLAL1Q5VWZ2 237 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 C17orf99Q6UX52 265 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 RDH10Q8IZV5 341 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 FAM109AQ8N4B1 249 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 OR8J1Q8NGP2 316 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 SMG7Q92540 1137 aaKnown RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 TRIM63Q969Q1 353 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 MS4A3Q96HJ5 214 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 FCRL4Q96PJ5 515 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 NUDT15Q9NV35 164 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 TEX10Q9NXF1 929 aaPredicted RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 ING3Q9NXR8 418 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 CNOT2Q9NZN8 540 aaKnown RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 MGAT4AQ9UM21 535 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 DYRK1BQ9Y463 629 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 SCN10AQ9Y5Y9 1956 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 MN1Q10571 1320 aaPredicted RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 MANSC4A6NHS7 340 aaPredicted RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 TSPAN4O14817 238 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 PRKAR1AP10644 381 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 AP1S2P56377 157 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 RHAGQ02094 409 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 SP3Q02447 781 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 TMEM115Q12893 351 aaPredicted RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 LASP1Q14847 261 aaKnown RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 ZMYND11Q15326 602 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.71□□□□□ -0.542e-8■■■■□ 26.5
HSPG2-211ENST00000486901 MKRN2Q9H000 416 aaKnown RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 ISG20L2Q9H9L3 353 aaKnown RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 CUEDC1Q9NWM3 386 aaPredicted RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 WSB2Q9NYS7 404 aaPredicted RBP11.71□□□□□ -0.54
HSPG2-211ENST00000486901 PTGFRNQ9P2B2 879 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 GULP1Q9UBP9 304 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 CORO2BQ9UQ03 480 aa11.71□□□□□ -0.54
HSPG2-211ENST00000486901 H7BY64 318 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 H7C4K7 107 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 KLHL18O94889 574 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 IFNA14P01570 189 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 CD3GP09693 182 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 ARAFP10398 606 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 PPIBP23284 216 aaKnown RBP11.7□□□□□ -0.54
HSPG2-211ENST00000486901 RECQLP46063 649 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-211ENST00000486901 SPIN4Q56A73 249 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 TJAP1Q5JTD0 557 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 C19orf48Q6RUI8 117 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 OR51G2Q8NGK0 314 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 AP2M1Q96CW1 435 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 ORAI1Q96D31 301 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 PRAP1Q96NZ9 151 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 TREX2Q9BQ50 279 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-211ENST00000486901 CWH43Q9H720 699 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 CAPN10Q9HC96 672 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 DMRT3Q9NQL9 472 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 ZNF224Q9NZL3 707 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 ASF1AQ9Y294 204 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 TRAPPC4Q9Y296 219 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 Q9Y3F1 56 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 PRAMEF27A3QJZ7 478 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 SH3D21A4FU49 640 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 RAB36O95755 333 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 ACRP10323 421 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 CXCL3P19876 107 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 SLC6A11P48066 632 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 EEF1A2Q05639 463 aaKnown RBP11.7□□□□□ -0.54
HSPG2-211ENST00000486901 ZNF630Q2M218 657 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-211ENST00000486901 SETD6Q8TBK2 473 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 ZFAND1Q8TCF1 268 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 C11orf24Q96F05 449 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-211ENST00000486901 RIPOR3Q96MK2 946 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 FOPNLQ96NB1 174 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 GDF15Q99988 308 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 TAC3Q9UHF0 121 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 KCNE3Q9Y6H6 103 aa11.7□□□□□ -0.54
HSPG2-211ENST00000486901 ELK1P19419 428 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 KLHL12Q53G59 568 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 TOR2AQ5JU69 321 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 HSDL2Q6YN16 418 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 PROKR2Q8NFJ6 384 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 ZNF461Q8TAF7 563 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 TMEM169Q96HH4 297 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 ABCG5Q9H222 651 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 THSD1Q9NS62 852 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 NPAP1Q9NZP6 1156 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 SLC45A1Q9Y2W3 748 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 H0YIV9 168 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms