RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ATP5A1P25705 553 aaKnown RBP13.6□□□□□ -0.23
U2AF1-211ENST00000486519 ABCD3P28288 659 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 GCKP35557 465 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 C21orf58P58505 322 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 SETDB1Q15047 1291 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 RBM20Q5T481 1227 aaKnown RBP13.6□□□□□ -0.23
U2AF1-211ENST00000486519 TMIGD1Q6UXZ0 262 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 GPSM1Q86YR5 675 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 MYO1HQ8N1T3 1032 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 PLD6Q8N2A8 252 aaKnown RBP13.6□□□□□ -0.23
U2AF1-211ENST00000486519 BBOF1Q8ND07 529 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 HIST1H2AHQ96KK5 128 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 HIST1H2AJQ99878 128 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 H2AFJQ9BTM1 129 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 OSBPL11Q9BXB4 747 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 CACNG6Q9BXT2 260 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 ACTR8Q9H981 624 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 EHD3Q9NZN3 535 aa13.6□□□□□ -0.23
U2AF1-211ENST00000486519 A0A088AWK7 358 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 GOLGA6L9A6NEM1 432 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 DPRXA6NFQ7 191 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 ZIC3O60481 467 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 CLEC3AO75596 197 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 CD3EP07766 207 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 CT62P0C5K7 136 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 C1GALT1C1LP0DN25 315 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 ALOX15P16050 662 aaPredicted RBP13.59□□□□□ -0.23
U2AF1-211ENST00000486519 SLC25A16P16260 332 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 ZNF10P21506 573 aaPredicted RBP13.59□□□□□ -0.23
U2AF1-211ENST00000486519 CPN2P22792 545 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 GDF5P43026 501 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 SLC6A8P48029 635 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 TERF1P54274 439 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 RPS13P62277 151 aaKnown RBP13.59□□□□□ -0.23
U2AF1-211ENST00000486519 PLIN5Q00G26 463 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 SNX1Q13596 522 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 DOC2AQ14183 400 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 SPRED3Q2MJR0 410 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 OR5M10Q6IEU7 315 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 C11orf71Q6IPW1 123 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 SCIMPQ6UWF3 145 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 PALM2Q8IXS6 379 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 ACOT4Q8N9L9 421 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 BANPQ8N9N5 519 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 C1orf54Q8WWF1 131 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 TP53INP1Q96A56 240 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 S100PBPQ96BU1 408 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 RBM18Q96H35 190 aaKnown RBP13.59□□□□□ -0.23
U2AF1-211ENST00000486519 ALG2Q9H553 416 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 SNX15Q9NRS6 342 aa13.59□□□□□ -0.23
U2AF1-211ENST00000486519 ZNF490Q9ULM2 529 aaPredicted RBP13.59□□□□□ -0.23
U2AF1-211ENST00000486519 VWFP04275 2813 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 TMPRSS2O15393 492 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 DYRK3O43781 588 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 PTMAP06454 111 aaKnown RBP13.58□□□□□ -0.24
U2AF1-211ENST00000486519 CCDC166P0CW27 439 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 HNF1AP20823 631 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 STIP1P31948 543 aaKnown RBP13.58□□□□□ -0.24
U2AF1-211ENST00000486519 GZMKP49863 264 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 ACTG1P63261 375 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 BSPH1Q075Z2 132 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 PON3Q15166 354 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 NRF1Q16656 503 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 DNAJC14Q6Y2X3 702 aaPredicted RBP13.58□□□□□ -0.24
U2AF1-211ENST00000486519 FAM214BQ7L5A3 538 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 FAM168AQ92567 244 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 ZNF669Q96BR6 464 aaPredicted RBP13.58□□□□□ -0.24
U2AF1-211ENST00000486519 NXF5Q9H1B4 397 aaKnown RBP13.58□□□□□ -0.24
U2AF1-211ENST00000486519 PLSCR4Q9NRQ2 329 aa13.58□□□□□ -0.24
U2AF1-211ENST00000486519 ZCWPW2A0A1B0GU75 182 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 OR6C76A6NM76 312 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 CAPN14A8MX76 684 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 SHISA9B4DS77 424 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 SAP18O00422 153 aaKnown RBP13.57□□□□□ -0.24
U2AF1-211ENST00000486519 UGT2B11O75310 529 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 CBR3O75828 277 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 RGS9O75916 674 aaPredicted RBP13.57□□□□□ -0.24
U2AF1-211ENST00000486519 NTN1O95631 604 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 AIFM1O95831 613 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 CD22P20273 847 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 SRD5A2P31213 254 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 RGS4P49798 205 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 AP1S2P56377 157 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 BASP1P80723 227 aaKnown RBP13.57□□□□□ -0.24
U2AF1-211ENST00000486519 DHX34Q14147 1143 aaKnown RBP13.57□□□□□ -0.24
U2AF1-211ENST00000486519 RCN2Q14257 317 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 GGTLC2Q14390 218 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 AAGABQ6PD74 315 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 ZNF615Q8N8J6 731 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 OR5M1Q8NGP8 315 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 C3orf49Q96BT1 292 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.57□□□□□ -0.24
U2AF1-211ENST00000486519 CISD1Q9NZ45 108 aaKnown RBP13.57□□□□□ -0.24
U2AF1-211ENST00000486519 PLCE1Q9P212 2302 aa13.57□□□□□ -0.24
U2AF1-211ENST00000486519 IGHV4-61A0A0C4DH41 118 aa13.56□□□□□ -0.24
U2AF1-211ENST00000486519 TMEM89A2RUT3 159 aa13.56□□□□□ -0.24
U2AF1-211ENST00000486519 GLOD5A6NK44 160 aa13.56□□□□□ -0.24
U2AF1-211ENST00000486519 VWC2LB2RUY7 222 aa13.56□□□□□ -0.24
U2AF1-211ENST00000486519 SEC14L5O43304 696 aa13.56□□□□□ -0.24
U2AF1-211ENST00000486519 ABCB7O75027 752 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms