RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 FAM111BQ6SJ93 734 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 LYPD8Q6UX82 237 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 C3P1Q6ZMU1 363 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 PRR22Q8IZ63 422 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 FAM9CQ8IZT9 166 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 TMEM251Q8N6I4 163 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF615Q8N8J6 731 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF441Q8N8Z8 693 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 C17orf47Q8NEP4 570 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 OR52R1Q8NGF1 315 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 TP53INP1Q96A56 240 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 CNRIP1Q96F85 164 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-208ENST00000486404 BBS4Q96RK4 519 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 TRMOQ9BU70 441 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 ITPAQ9BY32 194 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 ROPN1BQ9BZX4 212 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-208ENST00000486404 TP63Q9H3D4 680 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-208ENST00000486404 ZDHHC11Q9H8X9 412 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 ROPN1Q9HAT0 212 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-208ENST00000486404 PRODH2Q9UF12 536 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 PLLPQ9Y342 182 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 POLR3HQ9Y535 204 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-208ENST00000486404 CHCHD2Q9Y6H1 151 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-208ENST00000486404 PHF3Q92576 2039 aaKnown RBP11.86□□□□□ -0.51
CHMP3-208ENST00000486404 SERTM1A2A2V5 107 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 E9PLN8 166 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 AZIN1O14977 448 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 RGS14O43566 566 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 TRIM13O60858 407 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 SPAG7O75391 227 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 GLSO94925 669 aaPredicted RBP11.86□□□□□ -0.51
CHMP3-208ENST00000486404 NEFHP12036 1026 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 PCSK2P16519 638 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 MAN2A2P49641 1150 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 FBXW4P57775 412 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 MRPS35P82673 323 aaKnown RBP11.86□□□□□ -0.51
CHMP3-208ENST00000486404 MAP4K2Q12851 820 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 ART3Q13508 389 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 NTRK2Q16620 822 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 KRT71Q3SY84 523 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 GALNT18Q6P9A2 607 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 TMEM64Q6YI46 380 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 FGD2Q7Z6J4 655 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 LIX1Q8N485 282 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 BANPQ8N9N5 519 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 OR9A2Q8NGT5 310 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF675Q8TD23 568 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 VKORC1Q9BQB6 163 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF703Q9H7S9 590 aaPredicted RBP11.86□□□□□ -0.51
CHMP3-208ENST00000486404 ZFP64Q9NPA5 681 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 EHD3Q9NZN3 535 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 DTX4Q9Y2E6 619 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 NPFFR2Q9Y5X5 522 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 LIPGQ9Y5X9 500 aa11.86□□□□□ -0.51
CHMP3-208ENST00000486404 CENPEQ02224 2701 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 FIGNL2A6NMB9 653 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 ESPNB1AK53 854 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 NPIPA2E9PIF3 369 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 NPIPA3F8WFD2 350 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 SLC28A1O00337 649 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 BCKDKO14874 412 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 ACOX3O15254 700 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 SEC22BO75396 215 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 BCAS2O75934 225 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-208ENST00000486404 FREM3P0C091 2139 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 DDCP20711 480 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 GDF1P27539 372 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 ABCD3P28288 659 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 DCAF7P61962 342 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 ADORA2A-AS1P86434 159 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 DUSP2Q05923 314 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 C2orf80Q0P641 193 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF155Q12901 538 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF628Q5EBL2 1059 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 TMEM198Q66K66 360 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 XKRXQ6PP77 449 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 IKBIPQ70UQ0 350 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 TRIM46Q7Z4K8 759 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 DOLPP1Q86YN1 238 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 TICAM1Q8IUC6 712 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 CHERPQ8IWX8 916 aaKnown RBP11.85□□□□□ -0.51
CHMP3-208ENST00000486404 DDIASQ8IXT1 998 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 CCDC116Q8IYX3 515 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 FAM76AQ8TAV0 307 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 PHF10Q8WUB8 498 aaKnown RBP11.85□□□□□ -0.51
CHMP3-208ENST00000486404 ADIPOR1Q96A54 375 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 ERP27Q96DN0 273 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 HSPBAP1Q96EW2 488 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 LCORQ96JN0 433 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF681Q96N22 645 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 RILPQ96NA2 401 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 GATA5Q9BWX5 397 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-208ENST00000486404 NXF5Q9H1B4 397 aaKnown RBP11.85□□□□□ -0.51
CHMP3-208ENST00000486404 METTL7AQ9H8H3 244 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 EML4Q9HC35 981 aaKnown RBP11.85□□□□□ -0.51
CHMP3-208ENST00000486404 SH2D2AQ9NP31 389 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 MYNNQ9NPC7 610 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 SLC35C2Q9NQQ7 365 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 PLSCR2Q9NRY7 297 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 SIRT5Q9NXA8 310 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms