RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 NXPE4Q6UWF7 544 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 DHDDSQ86SQ9 333 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 DHFR2Q86XF0 187 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 SLC15A3Q8IY34 581 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 LIX1Q8N485 282 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 BCORP1Q8N888 145 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 OR51Q1Q8NH59 317 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 SLC13A3Q8WWT9 602 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 SLC5A11Q8WWX8 675 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 NANOS1Q8WY41 292 aaKnown RBP8.78□□□□□ -1
TMEM39A-208ENST00000486159 RERGQ96A58 199 aaPredicted RBP8.78□□□□□ -1
TMEM39A-208ENST00000486159 LRGUKQ96M69 825 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 SIGLEC12Q96PQ1 595 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 OR4K3Q96R72 315 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 TSPAN10Q9H1Z9 355 aaPredicted RBP8.78□□□□□ -1
TMEM39A-208ENST00000486159 MKKSQ9NPJ1 570 aaPredicted RBP8.78□□□□□ -1
TMEM39A-208ENST00000486159 FARSBQ9NSD9 589 aaKnown RBP8.78□□□□□ -1
TMEM39A-208ENST00000486159 STMN3Q9NZ72 180 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 WBP11Q9Y2W2 641 aaKnown RBP8.78□□□□□ -1
TMEM39A-208ENST00000486159 PCDHA9Q9Y5H5 950 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 MYO7BQ6PIF6 2116 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 CNTRLQ7Z7A1 2325 aa8.77□□□□□ -1
TMEM39A-208ENST00000486159 DIDO1Q9BTC0 2240 aaKnown RBP8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 TRGV8A0A0C4DH27 118 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 A0A1W2PQ72 361 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 PRORSD1PA6NEY8 169 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 PRSS44E7EML9 344 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 PRAMEF4O60810 478 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 BAG2O95816 211 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 PGRP06401 933 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 C8orf89P0DMQ9 161 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 UMPSP11172 480 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 CDH1P12830 882 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 DDX5P17844 614 aaKnown RBP8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 HRH2P25021 359 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 GSTM2P28161 218 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 HTR1EP28566 365 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 IL12AP29459 219 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 S100A3P33764 101 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 XCR1P46094 333 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 GSTM5P46439 218 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 TRPC1P48995 793 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 FXNQ16595 210 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 MAPKAPK3Q16644 382 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 BTBD16Q32M84 506 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 MINDY4Q4G0A6 757 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 TIGD2Q4W5G0 525 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 MTX3Q5HYI7 312 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 ZNF468Q5VIY5 522 aaPredicted RBP8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 PRAMEF9Q5VWM5 478 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 LCN8Q6JVE9 175 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 TMEM214Q6NUQ4 689 aaKnown RBP8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 NOXRED1Q6NXP6 359 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 GALNT18Q6P9A2 607 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 GFRALQ6UXV0 394 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 CPEB2Q7Z5Q1 589 aaKnown RBP8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 ANKRD37Q7Z713 158 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 BEST3Q8N1M1 668 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 PQLC1Q8N2U9 271 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 ZNF740Q8NDX6 193 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 BHLHE22Q8NFJ8 381 aaPredicted RBP8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 ABHD11Q8NFV4 315 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 OR7G3Q8NG95 312 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 ITLN2Q8WWU7 325 aaPredicted RBP8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 NR4A3Q92570 626 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 TSLPQ969D9 159 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 NEIL2Q969S2 332 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 TMEM125Q96AQ2 219 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 TM4SF19Q96DZ7 209 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 PEX11GQ96HA9 241 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 RSRC1Q96IZ7 334 aaKnown RBP8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 ITCHQ96J02 903 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 TEX37Q96LM6 180 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 PRPF18Q99633 342 aaKnown RBP8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 AHSPQ9NZD4 102 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 ACTR3BQ9P1U1 418 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 CDC14AQ9UNH5 594 aa8.77□□□□□ -1.01
TMEM39A-208ENST00000486159 A0A096LPI6 279 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 TRAV17A0A0B4J275 112 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 TCRBV3S1A0A5B6 114 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 ASPDHA6ND91 283 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 OR5H15A6NDH6 313 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 NME4O00746 187 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 GMNNO75496 209 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 SEMA3DO95025 777 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 CCNDBP1O95273 360 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 ACADSP16219 412 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 SDC1P18827 310 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 CD22P20273 847 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 PTX3P26022 381 aaPredicted RBP8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 SLC7A1P30825 629 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 CD96P40200 585 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 NR0B1P51843 470 aaKnown RBP8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 ABATP80404 500 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 MS4A2Q01362 244 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 RHAGQ02094 409 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 FAM53BQ14153 422 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 PAGE3Q5JUK9 113 aa8.76□□□□□ -1.01
TMEM39A-208ENST00000486159 CATSPEREQ5SY80 951 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms