RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MPIP34949 423 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 NCBP2P52298 156 aaKnown RBP eCLIP10.59□□□□□ -0.71
SND1-212ENST00000485871 MANFP55145 182 aaKnown RBP10.59□□□□□ -0.71
SND1-212ENST00000485871 FOXL2P58012 376 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 HSPB3Q12988 150 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 TARDBPQ13148 414 aaKnown RBP eCLIP10.59□□□□□ -0.71
SND1-212ENST00000485871 MED21Q13503 144 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 FXNQ16595 210 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 NKG7Q16617 165 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 PRICKLE4Q2TBC4 344 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 C3orf38Q5JPI3 329 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 SAXO2Q658L1 398 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 ZNF621Q6ZSS3 439 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 FKBP9P1Q75LS8 142 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 TIPARPQ7Z3E1 657 aaKnown RBP10.59□□□□□ -0.71
SND1-212ENST00000485871 LAPTM4BQ86VI4 370 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 CALHM3Q86XJ0 350 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 CLEC4FQ8N1N0 589 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 RNF148Q8N7C7 305 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 PLPP5Q8NEB5 264 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 OR9A2Q8NGT5 310 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 STT3BQ8TCJ2 826 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 SFXN5Q8TD22 340 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 ZNF675Q8TD23 568 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 CTHRC1Q96CG8 243 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 FAM120BQ96EK7 910 aaKnown RBP10.59□□□□□ -0.71
SND1-212ENST00000485871 SPSB2Q99619 263 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 KCTD14Q9BQ13 255 aaPredicted RBP10.59□□□□□ -0.71
SND1-212ENST00000485871 SLC35A5Q9BS91 424 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 ULBP3Q9BZM4 244 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 VN1R1Q9GZP7 353 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 CHST8Q9H2A9 424 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 ALG2Q9H553 416 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 TPT1P8Q9HAU6 139 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 CCM2LQ9NUG4 571 aaPredicted RBP10.59□□□□□ -0.71
SND1-212ENST00000485871 GIMAP4Q9NUV9 329 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 MAT2BQ9NZL9 334 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.59□□□□□ -0.71
SND1-212ENST00000485871 ZNF639Q9UID6 485 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 SCOCQ9UIL1 159 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 KLK13Q9UKR3 277 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 ACSL6Q9UKU0 697 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 PCDHGB4Q9UN71 923 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 KNTC1P50748 2209 aa10.59□□□□□ -0.71
SND1-212ENST00000485871 DSPP15924 2871 aaKnown RBP10.58□□□□□ -0.72
SND1-212ENST00000485871 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 MYOCOSA0A1B0GUC4 107 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 TCRBV16S1A1N1A0A5B0 115 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 FAM149AA5PLN7 773 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 CLIC1O00299 241 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 CLDN4O14493 209 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 STK17BO94768 372 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 ZGLP1P0C6A0 271 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 S1PR1P21453 382 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 PEX2P28328 305 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 GSK3BP49841 420 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 LIPEQ05469 1076 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 EXOSC6Q5RKV6 272 aaKnown RBP10.58□□□□□ -0.72
SND1-212ENST00000485871 FAM111BQ6SJ93 734 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 RNF111Q6ZNA4 994 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 TMPRSS7Q7RTY8 843 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 MARCH9Q86YJ5 346 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 KBTBD2Q8IY47 623 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 ST13P4Q8IZP2 240 aaPredicted RBP10.58□□□□□ -0.72
SND1-212ENST00000485871 PACRGLQ8N7B6 248 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 GALNT6Q8NCL4 622 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 OR7G2Q8NG99 324 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 OR52N2Q8NGI0 321 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 OR5AK3PQ8NH89 298 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 TSLPQ969D9 159 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 ELP4Q96EB1 424 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 NEURL3Q96EH8 262 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 GIMAP5Q96F15 307 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 ZNF583Q96ND8 569 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 ASPSCR1Q9BZE9 553 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 SERHL2Q9H4I8 314 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 KAT8Q9H7Z6 458 aaKnown RBP10.58□□□□□ -0.72
SND1-212ENST00000485871 YY1AP1Q9H869 796 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 C14orf105Q9NVL8 296 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 FOXJ2Q9P0K8 574 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 USP22Q9UPT9 525 aa10.58□□□□□ -0.72
SND1-212ENST00000485871 A0A087WV62 115 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 RNF103-CHMP3A0A140T963 221 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 DHRS12A0PJE2 317 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 UPK1AO00322 258 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 DENRO43583 198 aaKnown RBP10.57□□□□□ -0.72
SND1-212ENST00000485871 PLOD3O60568 738 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 SLITRK5O94991 958 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 KLK3P07288 261 aaPredicted RBP10.57□□□□□ -0.72
SND1-212ENST00000485871 CYC1P08574 325 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 BMP2P12643 396 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 AGXTP21549 392 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 GALNSP34059 522 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 SOAT1P35610 550 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 MC3RP41968 323 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 STT3AP46977 705 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 CCT3P49368 545 aaKnown RBP10.57□□□□□ -0.72
SND1-212ENST00000485871 ERFP50548 548 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 MAP4K2Q12851 820 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 SLC13A2Q13183 592 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms