RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 CDH13P55290 713 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 CRYZQ08257 329 aaKnown RBP15.7■□□□□ 0.1
SMC4-216ENST00000485645 MAP4K2Q12851 820 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 PRICKLE4Q2TBC4 344 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 SEM1Q6ZVN7 128 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 PM20D2Q8IYS1 436 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 ZNF483Q8TF39 744 aaPredicted RBP15.7■□□□□ 0.1
SMC4-216ENST00000485645 GNRHR2Q96P88 292 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 TIMP4Q99727 224 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 BRINP2Q9C0B6 783 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 UBQLN3Q9H347 655 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 BRF2Q9HAW0 419 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 NMRK1Q9NWW6 199 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 BCAP29Q9UHQ4 241 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 CES1P1Q9UKY3 287 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 PSME2Q9UL46 239 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 C2CD3Q4AC94 2353 aa15.7■□□□□ 0.1
SMC4-216ENST00000485645 A0A1B0GTL3 188 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 A8MT66 165 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 PPP6CO00743 305 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 CDH16O75309 829 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 ATP1B1P05026 303 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 ABCB1P08183 1280 aaPredicted RBP15.69■□□□□ 0.1
SMC4-216ENST00000485645 NAGAP17050 411 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 TSPAN8P19075 237 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 CSNK2A2P19784 350 aaPredicted RBP15.69■□□□□ 0.1
SMC4-216ENST00000485645 FEN1P39748 380 aaKnown RBP15.69■□□□□ 0.1
SMC4-216ENST00000485645 PEX19P40855 299 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 GALNT1Q10472 559 aaPredicted RBP15.69■□□□□ 0.1
SMC4-216ENST00000485645 TOMM20Q15388 145 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 SF3B4Q15427 424 aaKnown RBP eCLIP15.69■□□□□ 0.12e-8■■■■□ 23.1
SMC4-216ENST00000485645 ACSF3Q4G176 576 aaPredicted RBP15.69■□□□□ 0.1
SMC4-216ENST00000485645 GLE1Q53GS7 698 aaKnown RBP15.69■□□□□ 0.1
SMC4-216ENST00000485645 FNDC7Q5VTL7 733 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 LETMD1Q6P1Q0 360 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 FAM111BQ6SJ93 734 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 LACC1Q8IV20 430 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 UHMK1Q8TAS1 419 aaKnown RBP15.69■□□□□ 0.1
SMC4-216ENST00000485645 DCAKDQ8WVC6 231 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 TM4SF18Q96CE8 201 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 LRRC46Q96FV0 321 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 TMEM41AQ96HV5 264 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 C1QTNF3Q9BXJ4 246 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 NXF5Q9H1B4 397 aaKnown RBP15.69■□□□□ 0.1
SMC4-216ENST00000485645 MAT2BQ9NZL9 334 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 TRPS1Q9UHF7 1281 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 DTX4Q9Y2E6 619 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 C15orf41Q9Y2V0 281 aa15.69■□□□□ 0.1
SMC4-216ENST00000485645 A0A087WUV0 522 aaPredicted RBP15.68■□□□□ 0.1
SMC4-216ENST00000485645 SYT5O00445 386 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 DVL2O14641 736 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 PPM1BO75688 479 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 SNRPAP09012 282 aaKnown RBP15.68■□□□□ 0.1
SMC4-216ENST00000485645 SBK3P0C264 359 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 CD1EP15812 388 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 BMP5P22003 454 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 UQCRC1P31930 480 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 CEACAM8P31997 349 aaPredicted RBP15.68■□□□□ 0.1
SMC4-216ENST00000485645 TIMP3P35625 211 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 KIR2DL3P43628 341 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 MGAT2Q10469 447 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 EXOSC7Q15024 291 aaKnown RBP15.68■□□□□ 0.1
SMC4-216ENST00000485645 TEX35Q5T0J7 233 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 LGSNQ5TDP6 509 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 TIGD3Q6B0B8 471 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 VASNQ6EMK4 673 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 ZZZ3Q8IYH5 903 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 MMP21Q8N119 569 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 TMEM151AQ8N4L1 468 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 TNIP2Q8NFZ5 429 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 OR1J4Q8NGS1 313 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 KLHL29Q96CT2 875 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 HSPBAP1Q96EW2 488 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 FAIM2Q9BWQ8 316 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 ITPAQ9BY32 194 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 PRDM14Q9GZV8 571 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 METTL7AQ9H8H3 244 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 DNAJB12Q9NXW2 375 aaKnown RBP15.68■□□□□ 0.1
SMC4-216ENST00000485645 ZNF639Q9UID6 485 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 SLC6A5Q9Y345 797 aa15.68■□□□□ 0.1
SMC4-216ENST00000485645 EXPH5Q8NEV8 1989 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 GNB5O14775 395 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 OR4F21O95013 312 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 IL2RAP01589 272 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 TAC1P20366 129 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 DNAJA1P31689 397 aaKnown RBP15.67■□□□□ 0.1
SMC4-216ENST00000485645 HSD17B3P37058 310 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 ALDH9A1P49189 494 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 ASCL1P50553 236 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 ART1P52961 327 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 TRA2BP62995 288 aaKnown RBP15.67■□□□□ 0.1
SMC4-216ENST00000485645 CLCQ05315 142 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 SNTB1Q13884 538 aaKnown RBP15.67■□□□□ 0.1
SMC4-216ENST00000485645 NNATQ16517 81 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 EIPR1Q53HC9 387 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 NHSL2Q5HYW2 709 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 NUP54Q7Z3B4 507 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 C1orf52Q8N6N3 182 aaKnown RBP15.67■□□□□ 0.1
SMC4-216ENST00000485645 CEP112Q8N8E3 955 aa15.67■□□□□ 0.1
SMC4-216ENST00000485645 RELL2Q8NC24 303 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms