RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ISL2Q96A47 359 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 ARSGQ96EG1 525 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 GNRHR2Q96P88 292 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 ALG9Q9H6U8 611 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 WDR41Q9HAD4 459 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 HIVEP2P31629 2446 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 TCRBV9S1A1TA0A576 114 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 WASHC1A8K0Z3 465 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 FAM171A2A8MVW0 826 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 FOXE1O00358 373 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-227ENST00000485102 TMPRSS11DO60235 418 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 EEDO75530 441 aaKnown RBP11.88□□□□□ -0.51
HDAC6-227ENST00000485102 PRKRAO75569 313 aaKnown RBP11.88□□□□□ -0.51
HDAC6-227ENST00000485102 FAM58BPP0C7Q3 252 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 NR2F6P10588 404 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 PTPN6P29350 595 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 SPRP35270 261 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-227ENST00000485102 NRG3P56975 720 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 EEF1A1P68104 462 aaKnown RBP11.88□□□□□ -0.51
HDAC6-227ENST00000485102 MRPS25P82663 173 aaKnown RBP11.88□□□□□ -0.51
HDAC6-227ENST00000485102 DLG1Q12959 904 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 SNTA1Q13424 505 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 RCAN2Q14206 197 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 GRTP1Q5TC63 336 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 LGSNQ5TDP6 509 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 EEF1A1P5Q5VTE0 462 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 FBXW10Q5XX13 1052 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 BICRALQ6AI39 1079 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 METTL2BQ6P1Q9 378 aaKnown RBP11.88□□□□□ -0.51
HDAC6-227ENST00000485102 CCDC91Q7Z6B0 441 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 L3MBTL4Q8NA19 623 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 OR7G1Q8NGA0 311 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 LINC01560Q8TB33 94 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 ABTB1Q969K4 478 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-227ENST00000485102 REPS1Q96D71 796 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 TRIB1Q96RU8 372 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 MTERF1Q99551 399 aaKnown RBP11.88□□□□□ -0.51
HDAC6-227ENST00000485102 SFXN3Q9BWM7 321 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 NFU1Q9UMS0 254 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 CAMK2AQ9UQM7 478 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 SLC6A5Q9Y345 797 aa11.88□□□□□ -0.51
HDAC6-227ENST00000485102 A0A087WUV0 522 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-227ENST00000485102 A0A1B0GTL3 188 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 UBXN8O00124 270 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 SEMA3DO95025 777 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 RCBTB2O95199 551 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 LRATO95237 230 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 AIFM1O95831 613 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 ABCB1P08183 1280 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-227ENST00000485102 ABHD2P08910 425 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 S1PR1P21453 382 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 ABCD3P28288 659 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 CRABP2P29373 138 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 SSTR4P31391 388 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 MASP1P48740 699 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 NAGLUP54802 743 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 RPS13P62277 151 aaKnown RBP11.87□□□□□ -0.51
HDAC6-227ENST00000485102 PHEXP78562 749 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 DDX39BQ13838 428 aaKnown RBP11.87□□□□□ -0.51
HDAC6-227ENST00000485102 EIPR1Q53HC9 387 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 HLA-DQA1Q5Y7H0 255 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 OR52E8Q6IFG1 317 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 CYP20A1Q6UW02 462 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 SCIMPQ6UWF3 145 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 TMEM64Q6YI46 380 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 CXorf67Q86X51 503 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-227ENST00000485102 GALNT12Q8IXK2 581 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 LRRC75A-AS1Q8N1F1 130 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 RNF175Q8N4F7 328 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 C9orf106Q8NAJ2 232 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 WDR20Q8TBZ3 569 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 DOK4Q8TEW6 326 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 PIP5K1AQ99755 562 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 TM9SF2Q99805 663 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 YIPF4Q9BSR8 244 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 OR10A5Q9H207 317 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 TEX10Q9NXF1 929 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-227ENST00000485102 ROS1P08922 2347 aa11.87□□□□□ -0.51
HDAC6-227ENST00000485102 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 GLOD5A6NK44 160 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 SYCE1LA8MT33 242 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 SUPT3HB4E1H0 165 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 EEF1E1-BLOC1S5C9J1V9 151 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 PGRMC2O15173 223 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 ARHGEF9O43307 516 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 EEF1E1O43324 174 aaKnown RBP11.86□□□□□ -0.51
HDAC6-227ENST00000485102 ERN1O75460 977 aaKnown RBP11.86□□□□□ -0.51
HDAC6-227ENST00000485102 SUPT3HO75486 399 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 HEXAP06865 529 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 LTA4HP09960 611 aaKnown RBP11.86□□□□□ -0.51
HDAC6-227ENST00000485102 TMIGD3P0DMS9 266 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-227ENST00000485102 CYP4B1P13584 511 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 CHMP24386 653 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 CNTFP26441 200 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 PIK3R1P27986 724 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 ADSLP30566 484 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-227ENST00000485102 NKX6-1P78426 367 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-227ENST00000485102 GAB1Q13480 694 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 SETDB1Q15047 1291 aa11.86□□□□□ -0.51
HDAC6-227ENST00000485102 PCBP2Q15366 365 aaKnown RBP eCLIP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms