RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 SMU1Q2TAY7 513 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 ZNF791Q3KP31 576 aaPredicted RBP12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 ZNF324BQ6AW86 544 aaPredicted RBP12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 FAM180AQ6UWF9 173 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 TMEM64Q6YI46 380 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 WDR75Q8IWA0 830 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 KRTCAP2Q8N6L1 136 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 TMEM178AQ8NBL3 297 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 OR7A2PQ8NGA2 310 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 SLC22A8Q8TCC7 542 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 FAR1Q8WVX9 515 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 TP53INP1Q96A56 240 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 TMEM125Q96AQ2 219 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 ERP27Q96DN0 273 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 MTERF3Q96E29 417 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 NOP53Q9NZM5 478 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 SH3BP4Q9P0V3 963 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 ATP6V1HQ9UI12 483 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 ERVK-11Q9UQG0 969 aa12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 EIF3LQ9Y262 564 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-209ENST00000485035 ASPDHA6ND91 283 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 TCP11X1B4DZS4 312 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 PLOD3O60568 738 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 WISP1O95388 367 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 FBXO45P0C2W1 286 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 HPCAL1P37235 193 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 MC3RP41968 323 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 FRKP42685 505 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 UQCRFS1P47985 274 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 NR0B1P51843 470 aaKnown RBP12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 GPR85P60893 370 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 MAD2L1Q13257 205 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 NNATQ16517 81 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 HLA-DQA1Q5Y7H0 255 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 OPN5Q6U736 354 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 TMEM107Q6UX40 140 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 LARP4Q71RC2 724 aaKnown RBP eCLIP12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 ZNF551Q7Z340 670 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 MAVSQ7Z434 540 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 RIMKLAQ8IXN7 391 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 LRRC34Q8IZ02 419 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 SLC15A4Q8N697 577 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 BCORP1Q8N888 145 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 PSD4Q8NDX1 1056 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 C17orf47Q8NEP4 570 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 SPACA9Q96E40 222 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 FRMD6Q96NE9 622 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 SLX1AQ9BQ83 275 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 NXF5Q9H1B4 397 aaKnown RBP12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 ACBD3Q9H3P7 528 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 WDR55Q9H6Y2 383 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 SH2D2AQ9NP31 389 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 SLCO1B3Q9NPD5 702 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 TIMMDC1Q9NPL8 285 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 DEPPQ9NTK1 212 aa12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 INTS9Q9NV88 658 aaKnown RBP12.53□□□□□ -0.4
SOX2-OT-209ENST00000485035 A0A087WV62 115 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 A0A0G2JMM0 328 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 GOLGA8QA0A0J9YX86 632 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 A0A1W2PPB8 328 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 A0A1W2PRS3 328 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 GOLGA8OA6NCC3 632 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 KIR3DP1A8MWS1 328 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 GOLGA8NF8WBI6 632 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 UPK1AO00322 258 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 PLOD2O00469 737 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 ZNF195O14628 629 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 VPS4BO75351 444 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 BCAS2O75934 225 aaPredicted RBP12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 WISP2O76076 250 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 SLITRK5O94991 958 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 ALDOCP09972 364 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 CCL3P10147 92 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 LAMP1P11279 417 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 LBPP18428 481 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 EFNA1P20827 205 aaPredicted RBP12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 PRPS1L1P21108 318 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 EPHA3P29320 983 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 C21orf58P58505 322 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 HSPB3Q12988 150 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 OGFOD2Q6N063 350 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 RTL4Q6ZR62 310 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 R3HCC1LQ7Z5L2 792 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 SULF2Q8IWU5 870 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 TAGAPQ8N103 731 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 OR2L13Q8N349 312 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 CPSF7Q8N684 471 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 GOLM1Q8NBJ4 401 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 GALNT11Q8NCW6 608 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 PIWIL2Q8TC59 973 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 LRRC8CQ8TDW0 803 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 DYDC1Q8WWB3 177 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 NR4A3Q92570 626 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 ELP4Q96EB1 424 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 ZBED6CLQ96FA7 236 aaPredicted RBP12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 VSTM2LQ96N03 204 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 C7orf26Q96N11 449 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 AGPAT4Q9NRZ5 378 aa12.52□□□□□ -0.41
SOX2-OT-209ENST00000485035 OLAHQ9NV23 265 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms