RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 EMC8O43402 210 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 HPP00738 406 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 T-ENOLP0DO92 83 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 TRPC1P48995 793 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 DEFB109BQ30KR1 87 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 SPDYE7PQ495Y7 208 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 PLAG1Q6DJT9 500 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 WDR53Q7Z5U6 358 aaPredicted RBP13.13□□□□□ -0.31
SRSF6-202ENST00000483871 MSRB3Q8IXL7 192 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 ELP5Q8TE02 316 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 THAP3Q8WTV1 239 aaPredicted RBP13.13□□□□□ -0.31
SRSF6-202ENST00000483871 THAP4Q8WY91 577 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 IP6K3Q96PC2 410 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 SLC39A3Q9BRY0 314 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 TRIM8Q9BZR9 551 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 EQTNQ9NQ60 294 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 PTGFRNQ9P2B2 879 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 TAGLN3Q9UI15 199 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 PPIEQ9UNP9 301 aaKnown RBP13.13□□□□□ -0.31
SRSF6-202ENST00000483871 C19orf53Q9UNZ5 99 aaPredicted RBP13.13□□□□□ -0.31
SRSF6-202ENST00000483871 MGAQ8IWI9 3026 aa13.13□□□□□ -0.31
SRSF6-202ENST00000483871 DOCK10Q96BY6 2186 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 RNF103-CHMP3A0A140T963 221 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 MRASO14807 208 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 UBOX5O94941 541 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 KCNH1O95259 989 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 ITGAMP11215 1152 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 HOXB9P17482 250 aaPredicted RBP13.12□□□□□ -0.31
SRSF6-202ENST00000483871 UQCRC2P22695 453 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 PRDX6P30041 224 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 EMDP50402 254 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 LRRC74AQ0VAA2 488 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 TP53BP2Q13625 1128 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 NFYCQ13952 458 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 CAPRIN1Q14444 709 aaKnown RBP13.12□□□□□ -0.31
SRSF6-202ENST00000483871 KRT72Q14CN4 511 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 CRTC2Q53ET0 693 aaPredicted RBP13.12□□□□□ -0.31
SRSF6-202ENST00000483871 LRIF1Q5T3J3 769 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 C6orf89Q6UWU4 347 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 C6orf120Q7Z4R8 191 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 C9orf40Q8IXQ3 194 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 DPP10Q8N608 796 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 ZSCAN1Q8NBB4 408 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 C16orf52Q8NHV5 167 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 FBXO27Q8NI29 283 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 M1APQ8TC57 530 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 PNPT1Q8TCS8 783 aaKnown RBP13.12□□□□□ -0.31
SRSF6-202ENST00000483871 GIMAP5Q96F15 307 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 C16orf58Q96GQ5 468 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 ART5Q96L15 291 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 SLC35A5Q9BS91 424 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 YIPF4Q9BSR8 244 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 SEMA4CQ9C0C4 833 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 C3orf14Q9HBI5 128 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 NTMQ9P121 344 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 COPS7AQ9UBW8 275 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 VPS4AQ9UN37 437 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 POLHQ9Y253 713 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 A0A087WV48 116 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 A0A096LPI6 279 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 TRBV11-1A0A0K0K1C0 115 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 BBIP1A8MTZ0 92 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 K7ENP7 123 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 HMGN2P05204 90 aaKnown RBP13.12□□□□□ -0.31
SRSF6-202ENST00000483871 ST13P50502 369 aaKnown RBP13.12□□□□□ -0.31
SRSF6-202ENST00000483871 CLCN2P51788 898 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 RPS26P62854 115 aaKnown RBP13.12□□□□□ -0.31
SRSF6-202ENST00000483871 EXT1Q16394 746 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 BROXQ5VW32 411 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 INO80CQ6PI98 192 aaPredicted RBP13.12□□□□□ -0.31
SRSF6-202ENST00000483871 RNF111Q6ZNA4 994 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 C16orf47Q6ZP98 133 aaPredicted RBP13.12□□□□□ -0.31
SRSF6-202ENST00000483871 DHDDSQ86SQ9 333 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 ZFP90Q8TF47 636 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 OTUB1Q96FW1 271 aaPredicted RBP13.12□□□□□ -0.31
SRSF6-202ENST00000483871 VMP1Q96GC9 406 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 NSL1Q96IY1 281 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 VPS50Q96JG6 964 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 FER1L6-AS2Q96M78 137 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 ING2Q9H160 280 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 MMP25Q9NPA2 562 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 ATP13A2Q9NQ11 1180 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 GPATCH2Q9NW75 528 aa13.12□□□□□ -0.31
SRSF6-202ENST00000483871 TMEM200CA6NKL6 621 aa13.11□□□□□ -0.31
SRSF6-202ENST00000483871 A8MUI8 341 aa13.11□□□□□ -0.31
SRSF6-202ENST00000483871 ERN1O75460 977 aaKnown RBP13.11□□□□□ -0.31
SRSF6-202ENST00000483871 DNAJB5O75953 348 aa13.11□□□□□ -0.31
SRSF6-202ENST00000483871 SLITRK5O94991 958 aa13.11□□□□□ -0.31
SRSF6-202ENST00000483871 UNC5CO95185 931 aa13.11□□□□□ -0.31
SRSF6-202ENST00000483871 PSMG1O95456 288 aa13.11□□□□□ -0.31
SRSF6-202ENST00000483871 ZCCHC18P0CG32 403 aa13.11□□□□□ -0.31
SRSF6-202ENST00000483871 ESRRAP11474 423 aaPredicted RBP13.11□□□□□ -0.31
SRSF6-202ENST00000483871 CHI3L1P36222 383 aaPredicted RBP13.11□□□□□ -0.31
SRSF6-202ENST00000483871 NUDT2P50583 147 aa13.11□□□□□ -0.31
SRSF6-202ENST00000483871 RNF4P78317 190 aa13.11□□□□□ -0.31
SRSF6-202ENST00000483871 PRR5P85299 388 aa13.11□□□□□ -0.31
SRSF6-202ENST00000483871 LASP1Q14847 261 aaKnown RBP13.11□□□□□ -0.31
SRSF6-202ENST00000483871 FCRLBQ6BAA4 426 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms