RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ACTL8Q9H568 366 aa7.43□□□□□ -1.22
COL4A5-205ENST00000483338 YARS2Q9Y2Z4 477 aaKnown RBP7.43□□□□□ -1.22
COL4A5-205ENST00000483338 ABHD14A-ACY1A0A1B0GW23 586 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 LRRTM2O43300 516 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 GALR3O60755 368 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 PRAMEF2O60811 474 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 NQO2P16083 231 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 PPP3CBP16298 524 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 RAB4AP20338 218 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 GIFP27352 417 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 SLC1A2P43004 574 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 KRT33BQ14525 404 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 ZSWIM7Q19AV6 140 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 ALG11Q2TAA5 492 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 LBHQ53QV2 105 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 TPGS2Q68CL5 300 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 GSG1LQ6UXU4 331 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 PID1Q7Z2X4 250 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 GPR26Q8NDV2 337 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 ZNF248Q8NDW4 579 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 CCDC54Q8NEL0 328 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 THAP7Q9BT49 309 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 ARL6Q9H0F7 186 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 A0A0A6YYC8 382 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 I3L1I5 382 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 I6L893 689 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 MDM4O15151 490 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 MFSD11O43934 449 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 ANXA9O76027 345 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 FGF19O95750 216 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 C6P13671 934 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 SDHAP31040 664 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 CD86P42081 329 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 PXNP49023 591 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 UBE2IP63279 158 aaKnown RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 NRG1Q02297 640 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 MINDY4Q4G0A6 757 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 ATP13A5Q4VNC0 1218 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 SGO1Q5FBB7 561 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 SWSAP1Q6NVH7 229 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 FAM122BQ7Z309 247 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 CNTN4Q8IWV2 1026 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 GCDHQ92947 438 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 ATF6BQ99941 703 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 SPRTNQ9H040 489 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 MINDY3Q9H8M7 445 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 NRBP2Q9NSY0 501 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 POFUT2Q9Y2G5 429 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 LDLRAD4O15165 306 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 DHX15O43143 795 aaKnown RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 DGAT1O75907 488 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 SPDEFO95238 335 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 ABCD3P28288 659 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 CRABP1P29762 137 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 ILF3Q12906 894 aaKnown RBP eCLIP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 ADGRF1Q5T601 910 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 GPRC6AQ5T6X5 926 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 DEF8Q6ZN54 512 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 Q6ZTK2 550 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 TAS1R3Q7RTX0 852 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 TMEM185AQ8NFB2 350 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 CENPIQ92674 756 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 RFT1Q96AA3 541 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 TMEM143Q96AN5 459 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 KCTD7Q96MP8 289 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 FAM193BQ96PV7 902 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 ZNF559Q9BR84 538 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 RSRP1Q9BUV0 290 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 POLR2J2Q9GZM3 115 aaKnown RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 SLC25A32Q9H2D1 315 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 CNOT2Q9NZN8 540 aaKnown RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 NRXN2Q9P2S2 1712 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 NUP214P35658 2090 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-205ENST00000483338 NINQ8N4C6 2090 aa7.42□□□□□ -1.22
COL4A5-205ENST00000483338 A0A087X0M5 115 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 LOC285095A0A1B0GVY8 99 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 A0A1B0GX30 115 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ZNF593O00488 134 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ARPC5O15511 151 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 KRT33AO76009 404 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 NCR1O76036 304 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 C6orf47O95873 294 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 F2P00734 622 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 BEX3Q00994 111 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 CACNB2Q08289 660 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-205ENST00000483338 HTR4Q13639 388 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 XKR7Q5GH72 579 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 VTCN1Q7Z7D3 282 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ISCA2Q86U28 154 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 TP53INP2Q8IXH6 220 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 PTGR2Q8N8N7 351 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-205ENST00000483338 MTMR14Q8NCE2 650 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 DCAF4Q8WV16 495 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ROBO4Q8WZ75 1007 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 SERINC2Q96SA4 455 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 FICDQ9BVA6 458 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 HAPLN2Q9GZV7 340 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 TOLLIPQ9H0E2 274 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 TLNRD1Q9H1K6 362 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 UNKLQ9H9P5 680 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms