RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CAPN14A8MX76 684 aa17■□□□□ 0.31
CLK1-211ENST00000481641 MANBAO00462 879 aa17■□□□□ 0.31
CLK1-211ENST00000481641 TRAPPC6AO75865 159 aa17■□□□□ 0.31
CLK1-211ENST00000481641 SUPT7LO94864 414 aa17■□□□□ 0.31
CLK1-211ENST00000481641 HOXD4P09016 255 aaPredicted RBP17■□□□□ 0.31
CLK1-211ENST00000481641 ABCD3P28288 659 aa17■□□□□ 0.31
CLK1-211ENST00000481641 WNT3P56703 355 aa17■□□□□ 0.31
CLK1-211ENST00000481641 NRG3P56975 720 aa17■□□□□ 0.31
CLK1-211ENST00000481641 SNTB1Q13884 538 aaKnown RBP17■□□□□ 0.31
CLK1-211ENST00000481641 LTB4RQ15722 352 aa17■□□□□ 0.31
CLK1-211ENST00000481641 ZNF678Q5SXM1 525 aa17■□□□□ 0.31
CLK1-211ENST00000481641 TIFABQ6ZNK6 161 aa17■□□□□ 0.31
CLK1-211ENST00000481641 SEM1Q6ZVN7 128 aa17■□□□□ 0.31
CLK1-211ENST00000481641 ULK2Q8IYT8 1036 aa17■□□□□ 0.31
CLK1-211ENST00000481641 VWA5B2Q8N398 1253 aa17■□□□□ 0.31
CLK1-211ENST00000481641 KLHL29Q96CT2 875 aa17■□□□□ 0.31
CLK1-211ENST00000481641 TMEM237Q96Q45 408 aa17■□□□□ 0.31
CLK1-211ENST00000481641 ITPAQ9BY32 194 aa17■□□□□ 0.31
CLK1-211ENST00000481641 ANGPTL4Q9BY76 406 aa17■□□□□ 0.31
CLK1-211ENST00000481641 BRF2Q9HAW0 419 aa17■□□□□ 0.31
CLK1-211ENST00000481641 HEY2Q9UBP5 337 aa17■□□□□ 0.31
CLK1-211ENST00000481641 B4GALT7Q9UBV7 327 aa17■□□□□ 0.31
CLK1-211ENST00000481641 SPG11Q96JI7 2443 aa17■□□□□ 0.31
CLK1-211ENST00000481641 MED12Q93074 2177 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 GOLGA8RI6L899 631 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 GNB5O14775 395 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 GUCY1B2O75343 617 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 ABCB1P08183 1280 aaPredicted RBP16.99■□□□□ 0.31
CLK1-211ENST00000481641 FAM153BP0C7A2 387 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 CAPN3P20807 821 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 CASP3P42574 277 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 MASP1P48740 699 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 HTR6P50406 440 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 DLX5P56178 289 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 MAP4K2Q12851 820 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 FAM153CQ494X1 144 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 TRMT12Q53H54 448 aaKnown RBP16.99■□□□□ 0.31
CLK1-211ENST00000481641 TBCELQ5QJ74 424 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 WDR53Q7Z5U6 358 aaPredicted RBP16.99■□□□□ 0.31
CLK1-211ENST00000481641 CDH24Q86UP0 819 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 CNRIP1Q96F85 164 aaPredicted RBP16.99■□□□□ 0.31
CLK1-211ENST00000481641 ANKRA2Q9H9E1 313 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 VPS29Q9UBQ0 182 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 SLC6A5Q9Y345 797 aa16.99■□□□□ 0.31
CLK1-211ENST00000481641 C2orf72A6NCS6 295 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 GOLGA6L10A6NI86 522 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 FOXO6A8MYZ6 492 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 RIPK2O43353 540 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 NME6O75414 186 aaPredicted RBP16.98■□□□□ 0.31
CLK1-211ENST00000481641 CBX7O95931 251 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 ATP1B1P05026 303 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 ABHD2P08910 425 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 GABRA1P14867 456 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 PCSK2P16519 638 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 KRT15P19012 456 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 CSNK2A2P19784 350 aaPredicted RBP16.98■□□□□ 0.31
CLK1-211ENST00000481641 TAC1P20366 129 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 TMED10P49755 219 aaKnown RBP16.98■□□□□ 0.31
CLK1-211ENST00000481641 CDK9P50750 372 aaKnown RBP16.98■□□□□ 0.31
CLK1-211ENST00000481641 MRPS35P82673 323 aaKnown RBP16.98■□□□□ 0.31
CLK1-211ENST00000481641 CRYZQ08257 329 aaKnown RBP16.98■□□□□ 0.31
CLK1-211ENST00000481641 EIPR1Q53HC9 387 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 RIPPLY2Q5TAB7 128 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 LGSNQ5TDP6 509 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 PACS2Q86VP3 889 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 OR52R1Q8NGF1 315 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 ZNF681Q96N22 645 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 NODALQ96S42 347 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 TIMP4Q99727 224 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 ZNF559Q9BR84 538 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 UBQLN3Q9H347 655 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 EHD3Q9NZN3 535 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 ZNF639Q9UID6 485 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 C15orf41Q9Y2V0 281 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 PLLPQ9Y342 182 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 KIAA1549Q9HCM3 1950 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 HIVEP1P15822 2718 aa16.98■□□□□ 0.31
CLK1-211ENST00000481641 PPM1BO75688 479 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 SNX4O95219 450 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 ESRRBO95718 433 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 RAE1P78406 368 aaKnown RBP16.97■□□□□ 0.31
CLK1-211ENST00000481641 MYBPHQ13203 477 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 RASA2Q15283 850 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 TOMM20Q15388 145 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 SCIMPQ6UWF3 145 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 GPRIN3Q6ZVF9 776 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 CLYBLQ8N0X4 340 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 NAXEQ8NCW5 288 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 C17orf47Q8NEP4 570 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 TNIP2Q8NFZ5 429 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 METTL6Q8TCB7 284 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 HGDQ93099 445 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 CTHRC1Q96CG8 243 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 OMA1Q96E52 524 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 KCNA7Q96RP8 456 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 ZNF382Q96SR6 550 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 SECISBP2Q96T21 854 aaKnown RBP16.97■□□□□ 0.31
CLK1-211ENST00000481641 FAIM2Q9BWQ8 316 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 ACPTQ9BZG2 426 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 PFDN4Q9NQP4 134 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms