RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 NXF5Q9H1B4 397 aaKnown RBP11.85□□□□□ -0.51
ABCF3-215ENST00000481116 TUBB1Q9H4B7 451 aa11.85□□□□□ -0.51
ABCF3-215ENST00000481116 CCL27Q9Y4X3 112 aa11.85□□□□□ -0.51
ABCF3-215ENST00000481116 HRH3Q9Y5N1 445 aa11.85□□□□□ -0.51
ABCF3-215ENST00000481116 NPFFR2Q9Y5X5 522 aa11.85□□□□□ -0.51
ABCF3-215ENST00000481116 CHCHD2Q9Y6H1 151 aaPredicted RBP11.85□□□□□ -0.51
ABCF3-215ENST00000481116 AZIN1O14977 448 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 SEC22BO75396 215 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 GLSO94925 669 aaPredicted RBP11.84□□□□□ -0.51
ABCF3-215ENST00000481116 RFPL3SP0C7P2 107 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 LINC00032P0C843 101 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 ESRRAP11474 423 aaPredicted RBP11.84□□□□□ -0.51
ABCF3-215ENST00000481116 PTGS2P35354 604 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 ZNF844Q08AG5 666 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 ZNF763Q0D2J5 394 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 HEPACAMQ14CZ8 416 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 NTRK2Q16620 822 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.84□□□□□ -0.51
ABCF3-215ENST00000481116 KRT71Q3SY84 523 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 NOXRED1Q6NXP6 359 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 GK5Q6ZS86 529 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 CD163Q86VB7 1156 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 SLC22A16Q86VW1 577 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 TAGAPQ8N103 731 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 OR7G1Q8NGA0 311 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 OR9A2Q8NGT5 310 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 AGR3Q8TD06 166 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 TP53INP1Q96A56 240 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 CTHRC1Q96CG8 243 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 EGLN2Q96KS0 407 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 JSRP1Q96MG2 331 aaPredicted RBP11.84□□□□□ -0.51
ABCF3-215ENST00000481116 SMC6Q96SB8 1091 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 ZDHHC11Q9H8X9 412 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 IL1RL2Q9HB29 575 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 RRAGDQ9NQL2 400 aaPredicted RBP11.84□□□□□ -0.51
ABCF3-215ENST00000481116 SLC35C2Q9NQQ7 365 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 SIRT5Q9NXA8 310 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 TNFRSF10DQ9UBN6 386 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 SUCOQ9UBS9 1254 aaKnown RBP11.84□□□□□ -0.51
ABCF3-215ENST00000481116 CNOT11Q9UKZ1 510 aaKnown RBP11.84□□□□□ -0.51
ABCF3-215ENST00000481116 RAB21Q9UL25 225 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 EXO1Q9UQ84 846 aaKnown RBP11.84□□□□□ -0.51
ABCF3-215ENST00000481116 MEMO1Q9Y316 297 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.84□□□□□ -0.51
ABCF3-215ENST00000481116 CRYBG3Q68DQ2 2970 aa11.84□□□□□ -0.51
ABCF3-215ENST00000481116 PCNX3Q9H6A9 2034 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 ATP6AP2A0A1C7CYW4 349 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 H3BQF6 201 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 ACOT7O00154 380 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 ADAM10O14672 748 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 ATP6AP2O75787 350 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 RSL1D1O76021 490 aaKnown RBP11.83□□□□□ -0.52
ABCF3-215ENST00000481116 TPOP07202 933 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 DDCP20711 480 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 TACR1P25103 407 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 ARRB2P32121 409 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 DCTP40126 519 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 EMDP50402 254 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 KCNJ2P63252 427 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 KIAA0040Q15053 153 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 CDSNQ15517 529 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 ZNF628Q5EBL2 1059 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 ARL13AQ5H913 290 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-215ENST00000481116 KANK2Q63ZY3 851 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 FAM71E1Q6IPT2 247 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 BNC2Q6ZN30 1099 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-215ENST00000481116 Q6ZSR9 355 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 MRGPRGQ86SM5 289 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 TICAM1Q8IUC6 712 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 FBXW8Q8N3Y1 598 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.83□□□□□ -0.52
ABCF3-215ENST00000481116 FAM57AQ8TBR7 257 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 DIO2Q92813 273 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 GFM2Q969S9 779 aaKnown RBP11.83□□□□□ -0.52
ABCF3-215ENST00000481116 TMEM109Q9BVC6 243 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 PLSCR2Q9NRY7 297 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 EHD3Q9NZN3 535 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 GIMAP2Q9UG22 337 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 ENTPD4Q9Y227 616 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 DNAJC15Q9Y5T4 150 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 CACNA1CQ13936 2221 aa11.83□□□□□ -0.52
ABCF3-215ENST00000481116 LRRC3CA6NJW4 275 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 NPIPA2E9PIF3 369 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 NPIPA3F8WFD2 350 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 SLC28A1O00337 649 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 PRRG2O14669 202 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 TYROBPO43914 113 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 NPHS1O60500 1241 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 JUNP05412 331 aaKnown RBP11.82□□□□□ -0.52
ABCF3-215ENST00000481116 ABCD3P28288 659 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 GRNP28799 593 aaKnown RBP11.82□□□□□ -0.52
ABCF3-215ENST00000481116 NRG3P56975 720 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 RPS6KA2Q15349 733 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 UGT3A2Q3SY77 523 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 GALNTL6Q49A17 601 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 EMC4Q5J8M3 183 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 CES4AQ5XG92 561 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 ANKRD26P1Q6NSI1 321 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 FAM109AQ8N4B1 249 aa11.82□□□□□ -0.52
ABCF3-215ENST00000481116 RPRMLQ8N4K4 120 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms