RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 DVL2O14641 736 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 KRT15P19012 456 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 ABCD3P28288 659 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 CEACAM8P31997 349 aaPredicted RBP17.22■□□□□ 0.35
ABCF3-214ENST00000480562 FEN1P39748 380 aaKnown RBP17.22■□□□□ 0.35
ABCF3-214ENST00000480562 CDH13P55290 713 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 RPP38P78345 283 aaKnown RBP17.22■□□□□ 0.35
ABCF3-214ENST00000480562 MGAT2Q10469 447 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 GALNT1Q10472 559 aaPredicted RBP17.22■□□□□ 0.35
ABCF3-214ENST00000480562 EXOSC7Q15024 291 aaKnown RBP17.22■□□□□ 0.35
ABCF3-214ENST00000480562 GGTA1PQ4G0N0 100 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 LETMD1Q6P1Q0 360 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 VWA5B2Q8N398 1253 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 SIMC1Q8NDZ2 872 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 FUT8Q9BYC5 575 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 LIME1Q9H400 295 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 MTRF1LQ9UGC7 380 aaKnown RBP17.22■□□□□ 0.35
ABCF3-214ENST00000480562 BCAP29Q9UHQ4 241 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 IKBKGQ9Y6K9 419 aa17.22■□□□□ 0.35
ABCF3-214ENST00000480562 NF1P21359 2839 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 EXPH5Q8NEV8 1989 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 POC1B-GALNT4F8VUJ3 575 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 ERAL1O75616 437 aaKnown RBP17.21■□□□□ 0.35
ABCF3-214ENST00000480562 PDYNP01213 254 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 ABCB1P08183 1280 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-214ENST00000480562 RPS17P08708 135 aaKnown RBP17.21■□□□□ 0.35
ABCF3-214ENST00000480562 BMP7P18075 431 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 DEKP35659 375 aaKnown RBP17.21■□□□□ 0.35
ABCF3-214ENST00000480562 ASCL1P50553 236 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 DUSP2Q05923 314 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 TSNAXIP1Q2TAA8 658 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 PRICKLE4Q2TBC4 344 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 WIPI1Q5MNZ9 446 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-214ENST00000480562 DCST1Q5T197 706 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 C10orf62Q5T681 223 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-214ENST00000480562 VASNQ6EMK4 673 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 FAM180BQ6P0A1 224 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 SLC48A1Q6P1K1 146 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 POMZP3Q6PJE2 187 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 RELL1Q8IUW5 271 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 LACC1Q8IV20 430 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 C17orf47Q8NEP4 570 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 ADCY4Q8NFM4 1077 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 UHMK1Q8TAS1 419 aaKnown RBP17.21■□□□□ 0.35
ABCF3-214ENST00000480562 ZNF483Q8TF39 744 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-214ENST00000480562 SELENOMQ8WWX9 145 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 TM4SF18Q96CE8 201 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 TMEM41AQ96HV5 264 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 HBEGFQ99075 208 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 SH3GL2Q99962 352 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 ITPAQ9BY32 194 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 UGT2B28Q9BY64 529 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 PRDM14Q9GZV8 571 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 EPB41L4BQ9H329 900 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 METTL7AQ9H8H3 244 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 MAT2BQ9NZL9 334 aa17.21■□□□□ 0.35
ABCF3-214ENST00000480562 MAP1AP78559 2803 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-214ENST00000480562 KIAA1549Q9HCM3 1950 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 C1orf226A1L170 272 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 C2orf72A6NCS6 295 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 TRIM49D1C9J1S8 452 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 GUCY1B2O75343 617 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 PPM1BO75688 479 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 PTPN6P29350 595 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 TIMP3P35625 211 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 SERPINB9P50453 376 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 ZNF136P52737 540 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 TIGD3Q6B0B8 471 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 ANGPTL8Q6UXH0 198 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 YRDCQ86U90 279 aaKnown RBP17.2■□□□□ 0.34
ABCF3-214ENST00000480562 TRPC4APQ8TEL6 797 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 RNASE6Q93091 150 aaKnown RBP17.2■□□□□ 0.34
ABCF3-214ENST00000480562 KLHL29Q96CT2 875 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 NTNG2Q96CW9 530 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 WDYHV1Q96HA8 205 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 TRIB1Q96RU8 372 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 NODALQ96S42 347 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 MRPL57Q9BQC6 102 aaKnown RBP17.2■□□□□ 0.34
ABCF3-214ENST00000480562 MRPL46Q9H2W6 279 aaKnown RBP17.2■□□□□ 0.34
ABCF3-214ENST00000480562 CLEC4MQ9H2X3 399 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-214ENST00000480562 CCM2LQ9NUG4 571 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-214ENST00000480562 EHD3Q9NZN3 535 aa17.2■□□□□ 0.34
ABCF3-214ENST00000480562 DMGDHQ9UI17 866 aaKnown RBP17.2■□□□□ 0.34
ABCF3-214ENST00000480562 PRRC2AP48634 2157 aaKnown RBP17.2■□□□□ 0.34
ABCF3-214ENST00000480562 MED12Q93074 2177 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 GOLGA6L10A6NI86 522 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 A8MT66 165 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 KRT38O76015 456 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 URI1O94763 535 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-214ENST00000480562 OTCP00480 354 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 IL2RAP01589 272 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 SBK3P0C264 359 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 COL6A2P12110 1019 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 CSNK2A2P19784 350 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-214ENST00000480562 CNTFP26441 200 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 SOX18P35713 384 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 ALDH9A1P49189 494 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 AGFG1P52594 562 aaKnown RBP17.19■□□□□ 0.34
ABCF3-214ENST00000480562 NAGLUP54802 743 aa17.19■□□□□ 0.34
ABCF3-214ENST00000480562 MAP4K2Q12851 820 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms