RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	FAM86B1	Q8N7N1	296 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	OR52E4	Q8NGH9	312 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	OR10Q1	Q8NGQ4	319 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	STT3B	Q8TCJ2	826 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	SLC38A5	Q8WUX1	472 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	TSLP	Q969D9	159 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	OR7D2	Q96RA2	312 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	STRADB	Q9C0K7	418 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	RASSF4	Q9H2L5	321 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	ADAP2	Q9NPF8	381 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.48	□□□□□ -0.73
APTX-223	ENST00000479656	MKL2	Q9ULH7	1088 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	MMACHC	Q9Y4U1	282 aa		10.48	□□□□□ -0.73
APTX-223	ENST00000479656	PMS2P1	A4D2B8	440 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656		A8MUA0	341 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656		B4E171	279 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	HRK	O00198	91 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	CPNE3	O75131	537 aa	Known RBP	10.47	□□□□□ -0.73
APTX-223	ENST00000479656	PRKD3	O94806	890 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	RECK	O95980	971 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	BCHE	P06276	602 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	GPI	P06744	558 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ZGLP1	P0C6A0	271 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	UMPS	P11172	480 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	S1PR1	P21453	382 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	PSMA4	P25789	261 aa	Known RBP	10.47	□□□□□ -0.73
APTX-223	ENST00000479656	TSPAN7	P41732	249 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	KHK	P50053	298 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	OCA2	Q04671	838 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	BIK	Q13323	160 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ZNF267	Q14586	743 aa	Predicted RBP	10.47	□□□□□ -0.73
APTX-223	ENST00000479656	MYBPC3	Q14896	1274 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	MAPK11	Q15759	364 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	SYPL1	Q16563	259 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ZNF630	Q2M218	657 aa	Predicted RBP	10.47	□□□□□ -0.73
APTX-223	ENST00000479656	TBCEL	Q5QJ74	424 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	MLIP	Q5VWP3	458 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	OVCH1	Q7RTY7	1134 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	GLRX5	Q86SX6	157 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	VWA5B2	Q8N398	1253 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	GOLM1	Q8NBJ4	401 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	MIPOL1	Q8TD10	442 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	SLC35A4	Q96G79	324 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	MS4A4E	Q96PG1	132 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ACTRT3	Q9BYD9	372 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	TGIF2	Q9GZN2	237 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	A4GALT	Q9NPC4	353 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	PNO1	Q9NRX1	252 aa	Known RBP	10.47	□□□□□ -0.73
APTX-223	ENST00000479656	IFT80	Q9P2H3	777 aa	Predicted RBP	10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ANAPC2	Q9UJX6	822 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	IGLV3-12	A0A075B6K2	115 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	IGKV3D-11	A0A0A0MRZ8	115 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	TMX2-CTNND1	H3BSU7	103 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656		M0QX08	132 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	SLITRK5	O94991	958 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	CBX7	O95931	251 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ONECUT2	O95948	504 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	SSTR4	P31391	388 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	MAN2A2	P49641	1150 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	PGD	P52209	483 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	NSDHL	Q15738	373 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	MTX3	Q5HYI7	312 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	10.47	□□□□□ -0.73
APTX-223	ENST00000479656	HES3	Q5TGS1	186 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	MFSD12	Q6NUT3	480 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	FAM199X	Q6PEV8	388 aa	Predicted RBP	10.47	□□□□□ -0.73
APTX-223	ENST00000479656	OLIG3	Q7RTU3	272 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ASCL5	Q7RTU5	278 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	LILRA2	Q8N149	483 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	SLC16A11	Q8NCK7	471 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	OR52R1	Q8NGF1	315 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ADAMTS15	Q8TE58	950 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	SLC9A6	Q92581	669 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	TMEM19	Q96HH6	336 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	RNF145	Q96MT1	663 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	PKP2	Q99959	881 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ULBP3	Q9BZM4	244 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	VN1R1	Q9GZP7	353 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	SOX17	Q9H6I2	414 aa	Predicted RBP	10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ARMC1	Q9NVT9	282 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	THUMPD1	Q9NXG2	353 aa	Known RBP	10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ZNF639	Q9UID6	485 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	ANGPTL2	Q9UKU9	493 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	B3GALT1	Q9Y5Z6	326 aa		10.47	□□□□□ -0.73
APTX-223	ENST00000479656	OTOGL	Q3ZCN5	2332 aa		10.46	□□□□□ -0.73
APTX-223	ENST00000479656	TEX51	A0A1B0GUA7	166 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	SPAAR	A0A1B0GVQ0	90 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	C17orf105	B2RV13	164 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	C5orf58	C9J3I9	102 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	PROB1	E7EW31	1015 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	SLC28A2	O43868	658 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	TPST1	O60507	370 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	TIPRL	O75663	272 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	ZNF682	O95780	498 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	NR2F1	P10589	423 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	AGXT	P21549	392 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	MAGEA8	P43361	318 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	ANXA11	P50995	505 aa	Known RBP	10.46	□□□□□ -0.74
APTX-223	ENST00000479656	CRYBA2	P53672	197 aa		10.46	□□□□□ -0.74
APTX-223	ENST00000479656	DUSP8	Q13202	625 aa		10.46	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms