RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 FHL5Q5TD97 284 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 CROCCQ5TZA2 2017 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 Q6ZS92 163 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 ATCAYQ86WG3 371 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 THAP3Q8WTV1 239 aaPredicted RBP24.82■■□□□ 1.56
CCM2-211ENST00000478582 TESCQ96BS2 214 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 EBF4Q9BQW3 602 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 BHLHE41Q9C0J9 482 aaPredicted RBP24.82■■□□□ 1.56
CCM2-211ENST00000478582 TRIM45Q9H8W5 580 aaPredicted RBP24.82■■□□□ 1.56
CCM2-211ENST00000478582 PLA2G3Q9NZ20 509 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 CFL2Q9Y281 166 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 B3GNT3Q9Y2A9 372 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 OR5H15A6NDH6 313 aa24.81■■□□□ 1.56
CCM2-211ENST00000478582 UBDO15205 165 aa24.81■■□□□ 1.56
CCM2-211ENST00000478582 POLR3GO15318 223 aaPredicted RBP24.81■■□□□ 1.56
CCM2-211ENST00000478582 ITGA10O75578 1167 aa24.81■■□□□ 1.56
CCM2-211ENST00000478582 CLNS1AP54105 237 aaKnown RBP24.81■■□□□ 1.56
CCM2-211ENST00000478582 ARG2P78540 354 aa24.81■■□□□ 1.56
CCM2-211ENST00000478582 DUSP8Q13202 625 aa24.81■■□□□ 1.56
CCM2-211ENST00000478582 INPP5JQ15735 1006 aaPredicted RBP24.81■■□□□ 1.56
CCM2-211ENST00000478582 PLEKHN1Q494U1 663 aaPredicted RBP24.81■■□□□ 1.56
CCM2-211ENST00000478582 NUDT8Q8WV74 236 aa24.81■■□□□ 1.56
CCM2-211ENST00000478582 KAT2AQ92830 837 aa24.81■■□□□ 1.56
CCM2-211ENST00000478582 WWTR1Q9GZV5 400 aa24.81■■□□□ 1.56
CCM2-211ENST00000478582 LUZP4Q9P127 313 aa24.81■■□□□ 1.56
CCM2-211ENST00000478582 PRAMEF2O60811 474 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 MANFP55145 182 aaKnown RBP24.8■■□□□ 1.56
CCM2-211ENST00000478582 SRSF11Q05519 484 aaKnown RBP24.8■■□□□ 1.56
CCM2-211ENST00000478582 TUBA3CQ13748 450 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 EXOSC7Q15024 291 aaKnown RBP24.8■■□□□ 1.56
CCM2-211ENST00000478582 DPY19L1Q2PZI1 675 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 PDCD4Q53EL6 469 aaKnown RBP24.8■■□□□ 1.56
CCM2-211ENST00000478582 PIGGQ5H8A4 983 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 TMEM198Q66K66 360 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 TUBA3EQ6PEY2 450 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 ZNF551Q7Z340 670 aaPredicted RBP24.8■■□□□ 1.56
CCM2-211ENST00000478582 ZNF441Q8N8Z8 693 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 SIMC1Q8NDZ2 872 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 C17orf47Q8NEP4 570 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 OR7G2Q8NG99 324 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 OR8J2Q8NGG1 315 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 C16orf52Q8NHV5 167 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 TP53INP1Q96A56 240 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 ELP4Q96EB1 424 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 UTP23Q9BRU9 249 aaKnown RBP24.8■■□□□ 1.56
CCM2-211ENST00000478582 DUSP26Q9BV47 211 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 LIN28AQ9H9Z2 209 aaKnown RBP24.8■■□□□ 1.56
CCM2-211ENST00000478582 BCAP29Q9UHQ4 241 aa24.8■■□□□ 1.56
CCM2-211ENST00000478582 UBR5O95071 2799 aaPredicted RBP24.79■■□□□ 1.56
CCM2-211ENST00000478582 C2orf92A0A1B0GVN3 265 aa24.79■■□□□ 1.56
CCM2-211ENST00000478582 WWP2O00308 870 aa24.79■■□□□ 1.56
CCM2-211ENST00000478582 OR2J2O76002 312 aa24.79■■□□□ 1.56
CCM2-211ENST00000478582 CD96P40200 585 aa24.79■■□□□ 1.56
CCM2-211ENST00000478582 MRPL19P49406 292 aaKnown RBP24.79■■□□□ 1.56
CCM2-211ENST00000478582 EMDP50402 254 aa24.79■■□□□ 1.56
CCM2-211ENST00000478582 TNFSF10P50591 281 aa24.79■■□□□ 1.56
CCM2-211ENST00000478582 SLC15A4Q8N697 577 aa24.79■■□□□ 1.56
CCM2-211ENST00000478582 OR52R1Q8NGF1 315 aa24.79■■□□□ 1.56
CCM2-211ENST00000478582 ADIPOR1Q96A54 375 aa24.79■■□□□ 1.56
CCM2-211ENST00000478582 SDR39U1Q9NRG7 319 aaPredicted RBP24.79■■□□□ 1.56
CCM2-211ENST00000478582 PRODH2Q9UF12 536 aa24.79■■□□□ 1.56
CCM2-211ENST00000478582 C19orf53Q9UNZ5 99 aaPredicted RBP24.79■■□□□ 1.56
CCM2-211ENST00000478582 CSAG2Q9Y5P2 127 aa24.79■■□□□ 1.56
CCM2-211ENST00000478582 A0A1W2PRB8 838 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 VIMP08670 466 aaKnown RBP24.78■■□□□ 1.56
CCM2-211ENST00000478582 GPX3P22352 226 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 HLCSP50747 726 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 SSR4P51571 173 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 UFM1P61960 85 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 RPS6KA2Q15349 733 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 TLR1Q15399 786 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 C16orf47Q6ZP98 133 aaPredicted RBP24.78■■□□□ 1.56
CCM2-211ENST00000478582 OR2L13Q8N349 312 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 CATSPER1Q8NEC5 780 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 TEX37Q96LM6 180 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 RASL10BQ96S79 203 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 NPHS2Q9NP85 383 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 FGFR1OP2Q9NVK5 253 aa24.78■■□□□ 1.56
CCM2-211ENST00000478582 UPK1AO00322 258 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 MC3RP41968 323 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 IRX1P78414 480 aaPredicted RBP24.77■■□□□ 1.56
CCM2-211ENST00000478582 HSPB3Q12988 150 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 PGS1Q32NB8 556 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 ZNF468Q5VIY5 522 aaPredicted RBP24.77■■□□□ 1.56
CCM2-211ENST00000478582 HLA-DQA1Q5Y7H0 255 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 TMEM107Q6UX40 140 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 GPALPP1Q8IXQ4 340 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 GLB1L3Q8NCI6 653 aaPredicted RBP24.77■■□□□ 1.56
CCM2-211ENST00000478582 GALNT11Q8NCW6 608 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 RFWD2Q8NHY2 731 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 PSMA8Q8TAA3 256 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 OR5P2Q8WZ92 322 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 ZNF317Q96PQ6 595 aaPredicted RBP24.77■■□□□ 1.56
CCM2-211ENST00000478582 GAL3ST4Q96RP7 486 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 ANKRA2Q9H9E1 313 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 ZIM2Q9NZV7 527 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 NTMQ9P121 344 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 VPS4AQ9UN37 437 aa24.77■■□□□ 1.56
CCM2-211ENST00000478582 TRAV17A0A0B4J275 112 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 E9PBE3 544 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms