RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 MYNNQ9NPC7 610 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 EXOSC1Q9Y3B2 195 aaKnown RBP13.49□□□□□ -0.25
NPHP4-208ENST00000478423 KIAA0355O15063 1070 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 RNF13O43567 381 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF888P0CJ79 500 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-208ENST00000478423 NDUFV2P19404 249 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 F8A1P23610 371 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 CNR2P34972 360 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 DUSP3P51452 185 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF41P51814 821 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-208ENST00000478423 TMBIM6P55061 237 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 CBLBQ13191 982 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 WSCD2Q2TBF2 565 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF829Q3KNS6 432 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-208ENST00000478423 PJA1Q8NG27 643 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 OR5D16Q8NGK9 328 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 NELL2Q99435 816 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 DIABLOQ9NR28 239 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 MAGED1Q9Y5V3 778 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-208ENST00000478423 MCM3APO60318 1980 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 TCRBV3S1A0A5B6 114 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 OXSR1O95747 527 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-208ENST00000478423 FOSL2P15408 326 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 RASGEF1BQ0VAM2 473 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 GID4Q8IVV7 300 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 LGALS12Q96DT0 336 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 OMA1Q96E52 524 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 INSM2Q96T92 566 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-208ENST00000478423 ANKRD60Q9BZ19 345 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 SP140LQ9H930 580 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 IL20RAQ9UHF4 553 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 RREB1Q92766 1687 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 FRS3O43559 492 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 PSKH1P11801 424 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 HIST1H1TP22492 207 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-208ENST00000478423 SLC5A12Q1EHB4 618 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 CHFRQ96EP1 664 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 UHRF1Q96T88 793 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-208ENST00000478423 GINS4Q9BRT9 223 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 PREBQ9HCU5 417 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 INTS6Q9UL03 887 aaKnown RBP13.48□□□□□ -0.25
NPHP4-208ENST00000478423 SPTA1P02549 2419 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 KIR2DS5A0A0G2JLQ3 304 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 A0A0G2JNG1 304 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 I6L893 689 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-208ENST00000478423 KIR2DS3K7RE56 304 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 PLD2O14939 933 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 IGLV3-27P01718 113 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 CXCL10P02778 98 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 F3P13726 295 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 CR2P20023 1033 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 CTGFP29279 349 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 PCGF2P35227 344 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 HBA1P69905 142 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 KIR2DS5Q14953 304 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 TUBA3EQ6PEY2 450 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 NRMQ8IXM6 262 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 OR6N2Q8NGY6 317 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 MYEOVQ96EZ4 313 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 PCDHGB5Q9Y5G0 923 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 A0A0A6YYC8 382 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-208ENST00000478423 A0A1W2PQ72 361 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 I3L1I5 382 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-208ENST00000478423 RDH16O75452 317 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 PPM1BO75688 479 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 PLGP00747 810 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-208ENST00000478423 MTHFD2P13995 350 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 BCAP31P51572 246 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 MAPK14Q16539 360 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 NDUFA5Q16718 116 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 ALG10BQ5I7T1 473 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 OLFML2AQ68BL7 652 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 GALNTL5Q7Z4T8 443 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 GAL3ST3Q96A11 431 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 SERINC2Q96SA4 455 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 AGPAT4Q9NRZ5 378 aa13.48□□□□□ -0.25
NPHP4-208ENST00000478423 ZFR2Q9UPR6 939 aaKnown RBP13.48□□□□□ -0.25
NPHP4-208ENST00000478423 ADORA3P0DMS8 318 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 MAOBP27338 520 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 PYCR1P32322 319 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 NAA10P41227 235 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-208ENST00000478423 MAGEA12P43365 314 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 PMS2P3Q13401 168 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 CLCA4Q14CN2 919 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 DEFB133Q30KQ1 61 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 GPAT4Q86UL3 456 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 NSMAFQ92636 917 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 B3GNT4Q9C0J1 378 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 MCOLN1Q9GZU1 580 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 CPNE7Q9UBL6 633 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 LAMP5Q9UJQ1 280 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 UNC119BA6NIH7 251 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 EIF1AYO14602 144 aaKnown RBP13.47□□□□□ -0.25
NPHP4-208ENST00000478423 DNAJB5O75953 348 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF20P17024 532 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 HSD11B1P28845 292 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 GPR143P51810 404 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 HK3P52790 923 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 ANKDD1AQ495B1 522 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms