RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 DPYSL5Q9BPU6 564 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 MACROD1Q9BQ69 325 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 GRIP2Q9C0E4 1043 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 ANKRD19PQ9H560 264 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 CXorf56Q9H5V9 222 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 ARMC7Q9H6L4 198 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 MTHFD2LQ9H903 347 aaPredicted RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 SMURF2Q9HAU4 748 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 IL21RQ9HBE5 538 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 CCNB1IP1Q9NPC3 277 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 DUSP22Q9NRW4 184 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 EVA1BQ9NVM1 165 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 KLHL28Q9NXS3 571 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 SEMA5BQ9P283 1151 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 C5AR2Q9P296 337 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 TMEFF2Q9UIK5 374 aaPredicted RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 ACAD8Q9UKU7 415 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 ZNF232Q9UNY5 417 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 ATG2BQ96BY7 2078 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 REV3LO60673 3130 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 PLXND1Q9Y4D7 1925 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 A0A1W2PRQ8 180 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 SLC9B1P1A6NJY1 282 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 GLOD5A6NK44 160 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 RNF223E7ERA6 249 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 TNFRSF10AO00220 468 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 FAAHO00519 579 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 CYR61O00622 381 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 DUX1O43812 170 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 MPZL2O60487 215 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 B4GALT2O60909 372 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 CTNSO60931 367 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 CCNB2O95067 398 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 LGI1O95970 557 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 ADAP00813 363 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 C1QCP02747 245 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 EIF2S1P05198 315 aaKnown RBP7.45□□□□□ -1.22
VMA21-203ENST00000477649 THBS1P07996 1170 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 LINGO3P0C6S8 592 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 ALPPL2P10696 532 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 ST6GAL1P15907 406 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 TYRP1P17643 537 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 IFNGR2P38484 337 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 FEN1P39748 380 aaKnown RBP7.45□□□□□ -1.22
VMA21-203ENST00000477649 MC3RP41968 323 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 MLLT3P42568 568 aaPredicted RBP7.45□□□□□ -1.22
VMA21-203ENST00000477649 AVPR1BP47901 424 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 LIMS1P48059 325 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 ALDH3B2P48448 385 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 MAN2A2P49641 1150 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 DAPP51397 102 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 IST1P53990 364 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 MAZP56270 477 aaKnown RBP7.45□□□□□ -1.22
VMA21-203ENST00000477649 VSX2P58304 361 aaPredicted RBP7.45□□□□□ -1.22
VMA21-203ENST00000477649 SPIBQ01892 262 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 COX10Q12887 443 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 SQSTM1Q13501 440 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 TUBA3CQ13748 450 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 DGCR6Q14129 220 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 SERTAD2Q14140 314 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 LASP1Q14847 261 aaKnown RBP7.45□□□□□ -1.22
VMA21-203ENST00000477649 CLPPQ16740 277 aaPredicted RBP7.45□□□□□ -1.22
VMA21-203ENST00000477649 EIPR1Q53HC9 387 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 ZNF628Q5EBL2 1059 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 C6orf141Q5SZD1 244 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 BROXQ5VW32 411 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 LYSMD4Q5XG99 296 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 MFSD12Q6NUT3 480 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 ZNF773Q6PK81 442 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 DHRS4L2Q6PKH6 230 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 TMEM107Q6UX40 140 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 C16orf62Q7Z3J2 963 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 SZRD1Q7Z422 152 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 TMEM179BQ7Z7N9 219 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 TAGAPQ8N103 731 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 CA13Q8N1Q1 262 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 ARHGEF39Q8N4T4 335 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 FRMD1Q8N878 549 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 OR10G2Q8NGC3 310 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 OR9A2Q8NGT5 310 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 ZCCHC10Q8TBK6 192 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 APOBEC4Q8WW27 367 aaKnown RBP7.45□□□□□ -1.22
VMA21-203ENST00000477649 AHCYL2Q96HN2 611 aaKnown RBP7.45□□□□□ -1.22
VMA21-203ENST00000477649 FBXL20Q96IG2 436 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 FCRL4Q96PJ5 515 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 OR7D2Q96RA2 312 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 MBOAT4Q96T53 435 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 PIGUQ9H490 435 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 PAPOLBQ9NRJ5 636 aaKnown RBP7.45□□□□□ -1.22
VMA21-203ENST00000477649 ACER3Q9NUN7 267 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 SCN3BQ9NY72 215 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 NDRG4Q9ULP0 352 aaKnown RBP7.45□□□□□ -1.22
VMA21-203ENST00000477649 CDC14AQ9UNH5 594 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 MGAT4BQ9UQ53 548 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 CLCA2Q9UQC9 943 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 SH3GLB1Q9Y371 365 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 TPRKBQ9Y3C4 175 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 NAALAD2Q9Y3Q0 740 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 GMPPBQ9Y5P6 360 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 AK5Q9Y6K8 562 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms