RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 MAGIXQ9H6Y5 334 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 ABCB9Q9NP78 766 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 LATS2Q9NRM7 1088 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 GAB2Q9UQC2 676 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 DOCK4Q8N1I0 1966 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 UBA6A0AVT1 1052 aaPredicted RBP12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 LCHNA4D1U4 455 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 DRGXA6NNA5 263 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 CLCA1A8K7I4 914 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 UGDHO60701 494 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 PTBP3O95758 552 aaKnown RBP12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 HCKP08631 526 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 ANXA8P13928 327 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 GGT1P19440 569 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 ITPKAP23677 461 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 SLC6A1P30531 599 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 SDHAP31040 664 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 SLC11A2P49281 568 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 MRPL19P49406 292 aaKnown RBP12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 RAB2AP61019 212 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 ARTNQ5T4W7 220 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 GPRC6AQ5T6X5 926 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 ANXA8L1Q5VT79 327 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 FBXL22Q6P050 247 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 TMEM135Q86UB9 458 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 MOSPD2Q8NHP6 518 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 DNAJB14Q8TBM8 379 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 DTD1Q8TEA8 209 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 SNX33Q8WV41 574 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 ZNF669Q96BR6 464 aaPredicted RBP12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 SLC25A36Q96CQ1 311 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 SPACA7Q96KW9 195 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 TBL1YQ9BQ87 522 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 ZNF559Q9BR84 538 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 OPN3Q9H1Y3 402 aaPredicted RBP12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 RIBC2Q9H4K1 309 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 MYOZ1Q9NP98 299 aaPredicted RBP12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 SLC52A3Q9NQ40 469 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 WBP1LQ9NX94 342 aa12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 UXTQ9UBK9 157 aaPredicted RBP12.02□□□□□ -0.49
RTFDC1-207ENST00000477573 E9PI62 339 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 ZNF670-ZNF695F2Z2N8 137 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 F5H5T6 163 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 ARNTLO00327 626 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 TOX3O15405 576 aaPredicted RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 RAMP2O60895 175 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 EEDO75530 441 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 ABLIM3O94929 683 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 ALDOCP09972 364 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 ITGB7P26010 798 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 YBEYP58557 167 aaPredicted RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 E2F1Q01094 437 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 FOXO1Q12778 655 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 SLC14A2Q15849 920 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 MAJINQ3KP22 176 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 TMEM31Q5JXX7 168 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 LIPJQ5W064 366 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 RAET1GQ6H3X3 334 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 CES3Q6UWW8 571 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 CCDC117Q8IWD4 279 aaPredicted RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 SLC39A11Q8N1S5 342 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 ARMC10Q8N2F6 343 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 TMEM145Q8NBT3 493 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 COQ8AQ8NI60 647 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 CA5BP1Q8WTZ4 195 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 KCNJ9Q92806 393 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 ZNF689Q96CS4 500 aaPredicted RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 TCEAL4Q96EI5 215 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 PEX11GQ96HA9 241 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 HBEGFQ99075 208 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 SOSTQ9BQB4 213 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 FSD1LQ9BXM9 530 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 OR51J1Q9H342 316 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 SDR39U1Q9NRG7 319 aaPredicted RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 SPG21Q9NZD8 308 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 UBP1Q9NZI7 540 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 A0A096LPI6 279 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 LOC102723532A0A0G2JNH3 316 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 TIMP1P01033 207 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 SULT1A3P0DMM9 295 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 SULT1A4P0DMN0 295 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 ADRB3P13945 408 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 XPAP23025 273 aaPredicted RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 C21orf33P30042 268 aaPredicted RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 CRATP43155 626 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 INPP1P49441 399 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 GNG10P50151 68 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 OR4D2P58180 307 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 KRT33BQ14525 404 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 GANABQ14697 944 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 RBMS2Q15434 407 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 DNLZQ5SXM8 178 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 MARC1Q5VT66 337 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 FBXO46Q6PJ61 603 aaPredicted RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 UQCC3Q6UW78 93 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 VITQ6UXI7 678 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 WASH2PQ6VEQ5 465 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 FGD2Q7Z6J4 655 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 TRIM69Q86WT6 500 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 DTWD1Q8N5C7 304 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms