RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ARSKQ6UWY0 536 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 MAATS1Q7Z4T9 603 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 SLC35F6Q8N357 371 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 FBXO36Q8NEA4 188 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 SLC2A12Q8TD20 617 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 RGMAQ96B86 450 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 WDR34Q96EX3 536 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 RMND5BQ96G75 393 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 CPNE1Q99829 537 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 FOXC2Q99958 501 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 POLDIP3Q9BY77 421 aaKnown RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 NMRAL1Q9HBL8 299 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 PNPLA3Q9NST1 481 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 MED13LQ71F56 2210 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 ARHGAP21Q5T5U3 1957 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 ANKRD17O75179 2603 aaKnown RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 A0A0G2JN53 185 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 NCF1BA6NI72 391 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 NCF1CA8MVU1 366 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 EFCAB8A8MWE9 144 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 OR10H2O60403 315 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 WISP2O76076 250 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 GLSO94925 669 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 HPXP02790 462 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 CCDC166P0CW27 439 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 PCNAP12004 261 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 NCF1P14598 390 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 HIST1H1TP22492 207 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 CERS1P27544 350 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 SPRP35270 261 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 CASP2P42575 452 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 MAGEA5P43359 124 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 STT3AP46977 705 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 PIK3CGP48736 1102 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 NRG3P56975 720 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 CORO7P57737 925 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 TAS2R39P59534 338 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 EEF1A1P68104 462 aaKnown RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 CHRNEQ04844 493 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 CHIT1Q13231 466 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 ZNF750Q32MQ0 723 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 MROH9Q5TGP6 573 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 EEF1A1P5Q5VTE0 462 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 NCCRP1Q6ZVX7 275 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 RAPH1Q70E73 1250 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 TBC1D1Q86TI0 1168 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 CCDC71Q8IV32 467 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 KLHL7Q8IXQ5 586 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 TMEM251Q8N6I4 163 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 OR5M9Q8NGP3 310 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 FAM222BQ8WU58 562 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 PTPMT1Q8WUK0 201 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 HSPBAP1Q96EW2 488 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 SCYL1Q96KG9 808 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 UCK2Q9BZX2 261 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 ZFP64Q9NPA5 681 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 ACKR4Q9NPB9 350 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 LYARQ9NX58 379 aaKnown RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 NUDT4Q9NZJ9 180 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 OPTCQ9UBM4 332 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 BANF1O75531 89 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 FAM155BO75949 473 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 SNX4O95219 450 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 WNT11O96014 354 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ALOX15P16050 662 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ATP5A1P25705 553 aaKnown RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 GALNSP34059 522 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 GDNFP39905 211 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 GP5P40197 560 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 GDF5P43026 501 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 HSPA7P48741 367 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ASCL1P50553 236 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 SLAMF1Q13291 335 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 DOC2AQ14183 400 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 CDSNQ15517 529 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 GRTP1Q5TC63 336 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 OR4C11Q6IEV9 310 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 TRMT10BQ6PF06 316 aaKnown RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 CYP20A1Q6UW02 462 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 CYS1Q717R9 158 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 WDR53Q7Z5U6 358 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ZBED8Q8IZ13 594 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ST13P4Q8IZP2 240 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 MARVELD2Q8N4S9 558 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ACOT4Q8N9L9 421 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 PDPRQ8NCN5 879 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 CLRN3Q8NCR9 226 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ANP32BQ92688 251 aaKnown RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 SPACA9Q96E40 222 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 SENP5Q96HI0 755 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ZNF597Q96LX8 424 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 RPF2Q9H7B2 306 aaKnown RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 SNX15Q9NRS6 342 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 DEPPQ9NTK1 212 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 MOCS1Q9NZB8 636 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ZNF223Q9UK11 482 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 CFL2Q9Y281 166 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ATG4BQ9Y4P1 393 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 INTS1Q8N201 2190 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms