RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 C7orf34Q96L11 122 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 CIB1Q99828 191 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 ZNF639Q9UID6 485 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 RPS6KA6Q9UK32 745 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 A0A087WV62 115 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 SAC3D1A6NKF1 404 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 PDLIM1O00151 329 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 SOCS2O14508 198 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 CBFA2T3O75081 653 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 CBX7O95931 251 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 RECKO95980 971 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 CHRM4P08173 479 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 TNFRSF1BP20333 461 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 KHKP50053 298 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 CLCN2P51788 898 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 ARSFP54793 590 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 VLDLRP98155 873 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 SPEM2Q0P670 501 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 MAP4K2Q12851 820 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 DSG2Q14126 1118 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 CLPPQ16740 277 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-206ENST00000477085 VWA2Q5GFL6 755 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 WLSQ5T9L3 541 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 COX15Q7KZN9 410 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 ADAMTS18Q8TE60 1221 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 DNAJC9Q8WXX5 260 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 TREX2Q9BQ50 279 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-206ENST00000477085 DOHHQ9BU89 302 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 YIPF2Q9BWQ6 316 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 ACTRT3Q9BYD9 372 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 CXorf21Q9HAI6 301 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 FANCEQ9HB96 536 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 ZNF304Q9HCX3 659 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 IL1RAPQ9NPH3 570 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 ABCG2Q9UNQ0 655 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 DTNAQ9Y4J8 743 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 A0A1B0GX78 115 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 CLDN4O14493 209 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 SUV39H1O43463 412 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 SLC28A2O43868 658 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 MFN2O95140 757 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 BMP10O95393 424 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 ZIC2O95409 532 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-206ENST00000477085 LDLRP01130 860 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 GP1BAP07359 652 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 ACP2P11117 423 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 FCGR1AP12314 374 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 MAGEA8P43361 318 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 IST1P53990 364 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 HSD17B7P56937 341 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 FOXL2P58012 376 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 STX4Q12846 297 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 DUSP7Q16829 419 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 YOD1Q5VVQ6 348 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-206ENST00000477085 RHBDD2Q6NTF9 364 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 TBPL2Q6SJ96 375 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 LAPTM4BQ86VI4 370 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 ST13P4Q8IZP2 240 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-206ENST00000477085 BMPERQ8N8U9 685 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 SMYD1Q8NB12 490 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 PRSS33Q8NF86 280 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 EME1Q96AY2 570 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 MS4A4EQ96PG1 132 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 ZNF184Q99676 751 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-206ENST00000477085 VNN3Q9NY84 501 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 P2RX2Q9UBL9 471 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 FTSJ1Q9UET6 329 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 OAZ3Q9UMX2 235 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 ANGPT4Q9Y264 503 aa13.5□□□□□ -0.25
COL4A6-206ENST00000477085 MRPS33Q9Y291 106 aaKnown RBP13.5□□□□□ -0.25
COL4A6-206ENST00000477085 BLACEA4D250 179 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 C7orf72A4D263 438 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 hCG_2039718K7EN88 272 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 OR10H2O60403 315 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 MAP3K8P41279 467 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 STT3AP46977 705 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 DUSP5Q16690 384 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL4A6-206ENST00000477085 INTS11Q5TA45 600 aaKnown RBP13.49□□□□□ -0.25
COL4A6-206ENST00000477085 CDC73Q6P1J9 531 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 FKBP9P1Q75LS8 142 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 TMEM179BQ7Z7N9 219 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 HMGN2P46Q86SG4 172 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 COMTD1Q86VU5 262 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 ZDHHC21Q8IVQ6 265 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 SLC30A8Q8IWU4 369 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 GALNT4Q8N4A0 578 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 GPR32P1Q8NGA4 272 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 RIT1Q92963 219 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 ZG16BQ96DA0 208 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 CTRCQ99895 268 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 COL25A1Q9BXS0 654 aaPredicted RBP13.49□□□□□ -0.25
COL4A6-206ENST00000477085 PARD6AQ9NPB6 346 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 ADAP2Q9NPF8 381 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 ADPRHL2Q9NX46 363 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 THUMPD1Q9NXG2 353 aaKnown RBP13.49□□□□□ -0.25
COL4A6-206ENST00000477085 CDC14AQ9UNH5 594 aa13.49□□□□□ -0.25
COL4A6-206ENST00000477085 MAGED1Q9Y5V3 778 aaPredicted RBP13.49□□□□□ -0.25
COL4A6-206ENST00000477085 COL27A1Q8IZC6 1860 aaPredicted RBP13.49□□□□□ -0.25
COL4A6-206ENST00000477085 COL5A1P20908 1838 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms