RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ZNF543Q08ER8 600 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 PDZK1IP1Q13113 114 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 BOP1Q14137 746 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 FSCN1Q16658 493 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 C14orf28Q4W4Y0 310 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 PYY3Q5JQD4 70 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 STRIP1Q5VSL9 837 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 CD276Q5ZPR3 534 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 B3GNTL1Q67FW5 361 aaPredicted RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 LAIR2Q6ISS4 152 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 FAM45BPQ6NSW5 357 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 IL20RBQ6UXL0 311 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 CLEC9AQ6UXN8 241 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 MOB2Q70IA6 237 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 SLC16A14Q7RTX9 510 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 KANSL1Q7Z3B3 1105 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 TIPARPQ7Z3E1 657 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 PEG10Q86TG7 708 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 CBLN2Q8IUK8 224 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 NAXDQ8IW45 347 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 ZC3H3Q8IXZ2 948 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 PUSL1Q8N0Z8 303 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 SETD9Q8NE22 299 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 OR1S1Q8NH92 325 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 OR5K1Q8NHB7 308 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 COQ8AQ8NI60 647 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 THAP6Q8TBB0 222 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 FAM110BQ8TC76 370 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 FAM45AQ8TCE6 357 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 FBLIM1Q8WUP2 373 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 GPKOWQ92917 476 aaPredicted RBP eCLIP3.94□□□□□ -1.78
CD55-208ENST00000476590 TADA1Q96BN2 335 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 RAB3CQ96E17 227 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 SCMH1Q96GD3 660 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 FAM210BQ96KR6 192 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 NOL4LQ96MY1 436 aaPredicted RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 CDK15Q96Q40 435 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 HHIPQ96QV1 700 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 GFM1Q96RP9 751 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 ADAM2Q99965 735 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 NDUFAF3Q9BU61 184 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 TMED9Q9BVK6 235 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 BARHL1Q9BZE3 327 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 ELP3Q9H9T3 547 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 BRF2Q9HAW0 419 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 CACYBPQ9HB71 228 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 SIX2Q9NPC8 291 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 IL26Q9NPH9 171 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 ZNF225Q9UK10 706 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 SLC13A4Q9UKG4 626 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 TCFL5Q9UL49 500 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 CLCA2Q9UQC9 943 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 TMEM184BQ9Y519 407 aaPredicted RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 ERCC6L2Q5T890 1561 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 COL22A1Q8NFW1 1626 aaPredicted RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 AFDNP55196 1824 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 TOPAZ1Q8N9V7 1692 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 ROBO2Q9HCK4 1378 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 TBC1D3KA0A087X1G2 549 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 PRAMEF33A0A0G2JMD5 474 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 TMEM72A0PK05 275 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 TBC1D3FA6NER0 549 aaPredicted RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 NPIPA2E9PIF3 369 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 BLOC1S5-TXNDC5H3BN57 136 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 QSOX1O00391 747 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ADAM10O14672 748 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ANKRD28O15084 1053 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SMAD9O15198 467 aaKnown RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 SLC16A4O15374 487 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 INSIG1O15503 277 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 MBTPS2O43462 519 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 CHST10O43529 356 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 XPNPEP2O43895 674 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 PRAMEF10O60809 474 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 PRAMEF1O95521 474 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 FGF19O95750 216 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 AP2A1O95782 977 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 FADS2O95864 444 aaKnown RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 SERPINA3P01011 423 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 HLA-DQB1P01920 261 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 FTLP02792 175 aaPredicted RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 IFNA6P05013 189 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ITGAVP06756 1048 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SNRPB2P08579 225 aaKnown RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 AGAP20933 346 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 TBXA2RP21731 343 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 S100A2P29034 98 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 PCSK1P29120 753 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SRP9P49458 86 aaKnown RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 CCR4P51679 360 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SMSP52788 366 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ACTBP60709 375 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ACTA2P62736 377 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 YWHAZP63104 245 aaKnown RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 SUMO1P63165 101 aaKnown RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 ACTG1P63261 375 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ACTG2P63267 376 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ACTC1P68032 377 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ACTA1P68133 377 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ZP2Q05996 745 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms