RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CALHM3Q86XJ0 350 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 PTOV1Q86YD1 416 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 HORMAD2Q8N7B1 307 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 LZICQ8WZA0 190 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 FIG4Q92562 907 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 ULBP3Q9BZM4 244 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 LAMA5O15230 3695 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 MEN1O00255 615 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 ARPC2O15144 300 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 IL11RAQ14626 422 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.92■□□□□ 0.3
ATG4B-217ENST00000475693 C3orf38Q5JPI3 329 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 DNAJB8Q8NHS0 232 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 ASB9Q96DX5 294 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 MVB12AQ96EY5 273 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 TIMMDC1Q9NPL8 285 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 MKL2Q9ULH7 1088 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 CDC14AQ9UNH5 594 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 SRPK3Q9UPE1 567 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 KCNE3Q9Y6H6 103 aa16.92■□□□□ 0.3
ATG4B-217ENST00000475693 PGM3O95394 542 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 HMGN2P05204 90 aaKnown RBP16.91■□□□□ 0.3
ATG4B-217ENST00000475693 AQP1P29972 269 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 RORAP35398 523 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 NR1H2P55055 460 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 MRPS22P82650 360 aaKnown RBP16.91■□□□□ 0.3
ATG4B-217ENST00000475693 MGAT2Q10469 447 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 ILKQ13418 452 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 LASP1Q14847 261 aaKnown RBP16.91■□□□□ 0.3
ATG4B-217ENST00000475693 MLC1Q15049 377 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 SLC44A2Q8IWA5 706 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-217ENST00000475693 ZNF595Q8IYB9 648 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 TRIML2Q8N7C3 387 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 PSMA8Q8TAA3 256 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 STT3BQ8TCJ2 826 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 CHST8Q9H2A9 424 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 NEUROD4Q9HD90 331 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 FBXO8Q9NRD0 319 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 AHCTF1Q8WYP5 2266 aa16.91■□□□□ 0.3
ATG4B-217ENST00000475693 CLDN4O14493 209 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 OR10H2O60403 315 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 IFNA16P05015 189 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 PGDP52209 483 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 ZNF628Q5EBL2 1059 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 SAXO2Q658L1 398 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 LANCL3Q6ZV70 420 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 ZZZ3Q8IYH5 903 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 GALNT6Q8NCL4 622 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 NUP43Q8NFH3 380 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 MPP4Q96JB8 637 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 VN1R1Q9GZP7 353 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 SUCOQ9UBS9 1254 aaKnown RBP16.9■□□□□ 0.3
ATG4B-217ENST00000475693 PCDHB3Q9Y5E6 796 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 CFAP47Q6ZTR5 3102 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 IGHV3-20A0A0C4DH32 117 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 OR6B1O95007 311 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 DCDP81605 110 aaKnown RBP16.9■□□□□ 0.3
ATG4B-217ENST00000475693 MYBPC1Q00872 1141 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 TARDBPQ13148 414 aaKnown RBP eCLIP16.9■□□□□ 0.32e-12■■■■□ 21.7
ATG4B-217ENST00000475693 PRICKLE4Q2TBC4 344 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 NADK2Q4G0N4 442 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 IRAK1BP1Q5VVH5 260 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 GLYATQ6IB77 296 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 HMGN2P46Q86SG4 172 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 ZNF321PQ8N8H1 164 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 ZFP28Q8NHY6 868 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 NETO1Q8TDF5 533 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 NEURL3Q96EH8 262 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 SH3GL1Q99961 368 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 ADAP2Q9NPF8 381 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 PNO1Q9NRX1 252 aaKnown RBP16.9■□□□□ 0.3
ATG4B-217ENST00000475693 MAT2BQ9NZL9 334 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 SATB2Q9UPW6 733 aa16.9■□□□□ 0.3
ATG4B-217ENST00000475693 MRPS33Q9Y291 106 aaKnown RBP16.9■□□□□ 0.3
ATG4B-217ENST00000475693 RECKO95980 971 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 JMJD7P0C870 316 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 OR12D1P0DN82 309 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 SSTR4P31391 388 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 LRRC74AQ0VAA2 488 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 DUSP8Q13202 625 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 CEACAM20Q6UY09 585 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 GLRX5Q86SX6 157 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 DHFR2Q86XF0 187 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 LILRA2Q8N149 483 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 NATD1Q8N6N6 113 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 TMEM102Q8N9M5 508 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-217ENST00000475693 OR52N2Q8NGI0 321 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 NMD3Q96D46 503 aaKnown RBP16.89■□□□□ 0.29
ATG4B-217ENST00000475693 RBM18Q96H35 190 aaKnown RBP16.89■□□□□ 0.29
ATG4B-217ENST00000475693 STRADBQ9C0K7 418 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 DDX18Q9NVP1 670 aaKnown RBP16.89■□□□□ 0.29
ATG4B-217ENST00000475693 FOXJ2Q9P0K8 574 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 IFT80Q9P2H3 777 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-217ENST00000475693 PCDHGA1Q9Y5H4 931 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 ELOVL7A1L3X0 281 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 PRAMEF27A3QJZ7 478 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 TM4SF5O14894 197 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 ATP1B1P05026 303 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 ZGLP1P0C6A0 271 aa16.89■□□□□ 0.29
ATG4B-217ENST00000475693 RHAGQ02094 409 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms