RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 UPK1AO00322 258 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 PLOD2O00469 737 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 PEX12O00623 359 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 TERTO14746 1132 aaKnown RBP7.77□□□□□ -1.17
CNN3-205ENST00000474409 PLOD3O60568 738 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 CREG1O75629 220 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 CBX7O95931 251 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 COX6A1P12074 109 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 HOXB9P17482 250 aaPredicted RBP7.77□□□□□ -1.17
CNN3-205ENST00000474409 SLC6A2P23975 617 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 PTPN6P29350 595 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 SSTR4P31391 388 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 CPOXP36551 454 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 CRATP43155 626 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 PRIM2P49643 509 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 ANXA11P50995 505 aaKnown RBP7.77□□□□□ -1.17
CNN3-205ENST00000474409 SLC7A2P52569 658 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 CASP9P55211 416 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 RPS26P62854 115 aaKnown RBP7.77□□□□□ -1.17
CNN3-205ENST00000474409 MAP4K2Q12851 820 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 FADDQ13158 208 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 CLN3Q13286 438 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 LASP1Q14847 261 aaKnown RBP7.77□□□□□ -1.17
CNN3-205ENST00000474409 PCOLCEQ15113 449 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 ZNHIT3Q15649 155 aaPredicted RBP7.77□□□□□ -1.17
CNN3-205ENST00000474409 CYP51A1Q16850 503 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 TRMT12Q53H54 448 aaKnown RBP7.77□□□□□ -1.17
CNN3-205ENST00000474409 RUNDC3AQ59EK9 446 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 SAXO2Q658L1 398 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 SLC29A4Q7RTT9 530 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 C6orf120Q7Z4R8 191 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 PPP1R32Q7Z5V6 425 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 YTHDF3Q7Z739 585 aaKnown RBP7.77□□□□□ -1.17
CNN3-205ENST00000474409 MRGPREQ86SM8 312 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 RNF130Q86XS8 419 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 MSRB3Q8IXL7 192 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 OR2L13Q8N349 312 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 MORN4Q8NDC4 146 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 ZNF248Q8NDW4 579 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 B3GNT7Q8NFL0 401 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 OR7G1Q8NGA0 311 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 FBXO30Q8TB52 745 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 PTPMT1Q8WUK0 201 aaPredicted RBP7.77□□□□□ -1.17
CNN3-205ENST00000474409 FGF11Q92914 225 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 NCLNQ969V3 563 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 NEURL3Q96EH8 262 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 VMP1Q96GC9 406 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 FBXL20Q96IG2 436 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 PHF12Q96QT6 1004 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 GAL3ST4Q96RP7 486 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 HOPXQ9BPY8 73 aaPredicted RBP7.77□□□□□ -1.17
CNN3-205ENST00000474409 BTBD10Q9BSF8 475 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 THUMPD3Q9BV44 507 aaKnown RBP7.77□□□□□ -1.17
CNN3-205ENST00000474409 OR10A5Q9H207 317 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 C1orf21Q9H246 121 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 LRMDAQ9H2I8 198 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 PRODH2Q9UF12 536 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 ANGPTL2Q9UKU9 493 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 CFL2Q9Y281 166 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 APC2O95996 2303 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 URB1O60287 2271 aaKnown RBP7.76□□□□□ -1.17
CNN3-205ENST00000474409 LOC102723996A0A087X1L8 192 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 TRBV11-1A0A0K0K1C0 115 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 HRKO00198 91 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 SOCS6O14544 535 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 KLK10O43240 276 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 TLX3O43711 291 aaPredicted RBP7.76□□□□□ -1.17
CNN3-205ENST00000474409 DNAJC8O75937 253 aaPredicted RBP7.76□□□□□ -1.17
CNN3-205ENST00000474409 DDAH2O95865 285 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 HMGN2P05204 90 aaKnown RBP7.76□□□□□ -1.17
CNN3-205ENST00000474409 MATN1P21941 496 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 CLCN2P51788 898 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 SLC26A5P58743 744 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 VAC14Q08AM6 782 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 MGAT2Q10469 447 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 FUT7Q11130 342 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 ATP1A4Q13733 1029 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 SELPLGQ14242 412 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 EXT1Q16394 746 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 BTBD16Q32M84 506 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 LACTB2Q53H82 288 aaPredicted RBP7.76□□□□□ -1.17
CNN3-205ENST00000474409 RABL3Q5HYI8 236 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.76□□□□□ -1.17
CNN3-205ENST00000474409 GCNT6Q5T4J0 391 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 FHL5Q5TD97 284 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 HLA-DQA1Q5Y7H0 255 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 NANOGP8Q6NSW7 305 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 MFSD12Q6NUT3 480 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 C8orf82Q6P1X6 216 aaPredicted RBP7.76□□□□□ -1.17
CNN3-205ENST00000474409 TNFAIP8L2Q6P589 184 aaPredicted RBP7.76□□□□□ -1.17
CNN3-205ENST00000474409 KIRREL2Q6UWL6 708 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 NDUFAF7Q7L592 441 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 IFNEQ86WN2 208 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 ARHGAP24Q8N264 748 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 KIF2BQ8N4N8 673 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 OR11G2Q8NGC1 345 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 OR52N2Q8NGI0 321 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 OR5D16Q8NGK9 328 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 OR1N1Q8NGS0 311 aa7.76□□□□□ -1.17
CNN3-205ENST00000474409 SNIP1Q8TAD8 396 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms