RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 UGT3A2Q3SY77 523 aa13.12□□□□□ -0.31
VAMP4-203ENST00000474047 RFTN2Q52LD8 501 aaPredicted RBP13.12□□□□□ -0.31
VAMP4-203ENST00000474047 TMEM64Q6YI46 380 aa13.12□□□□□ -0.31
VAMP4-203ENST00000474047 OR2M7Q8NG81 312 aa13.12□□□□□ -0.31
VAMP4-203ENST00000474047 ZNF675Q8TD23 568 aa13.12□□□□□ -0.31
VAMP4-203ENST00000474047 MGARPQ8TDB4 240 aa13.12□□□□□ -0.31
VAMP4-203ENST00000474047 SSC4DQ8WTU2 575 aa13.12□□□□□ -0.31
VAMP4-203ENST00000474047 EGLN2Q96KS0 407 aa13.12□□□□□ -0.31
VAMP4-203ENST00000474047 TSSK3Q96PN8 268 aa13.12□□□□□ -0.31
VAMP4-203ENST00000474047 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
VAMP4-203ENST00000474047 NPFFR2Q9Y5X5 522 aa13.12□□□□□ -0.31
VAMP4-203ENST00000474047 TRGV8A0A0C4DH27 118 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 A0A1B0GUH1 482 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 ATP6AP2A0A1C7CYW4 349 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 TMEM120BA0PK00 339 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 NPIPB8E9PQR5 432 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 LRRTM2O43300 516 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 ITM2AO43736 263 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 CDC40O60508 579 aaKnown RBP eCLIP13.11□□□□□ -0.31
VAMP4-203ENST00000474047 ATP6AP2O75787 350 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 SNUPNO95149 360 aaKnown RBP13.11□□□□□ -0.31
VAMP4-203ENST00000474047 LRATO95237 230 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 NADKO95544 446 aaPredicted RBP13.11□□□□□ -0.31
VAMP4-203ENST00000474047 FBXO45P0C2W1 286 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 CCL3P10147 92 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 DDX5P17844 614 aaKnown RBP13.11□□□□□ -0.31
VAMP4-203ENST00000474047 GPX3P22352 226 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 ASMTP46597 345 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 DCAF7P61962 342 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 PPIAP62937 165 aaKnown RBP13.11□□□□□ -0.31
VAMP4-203ENST00000474047 KCNJ2P63252 427 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 RPP38P78345 283 aaKnown RBP13.11□□□□□ -0.31
VAMP4-203ENST00000474047 MPP2Q14168 576 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 NNATQ16517 81 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 C4orf17Q53FE4 359 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 KIRREL3Q8IZU9 778 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 GHDCQ8N2G8 530 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 ZFP62Q8NB50 900 aaPredicted RBP13.11□□□□□ -0.31
VAMP4-203ENST00000474047 CLHC1Q8NHS4 586 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 ADIPOR1Q96A54 375 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 PPCDCQ96CD2 204 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 CTHRC1Q96CG8 243 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 TUBGCP3Q96CW5 907 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 ERP27Q96DN0 273 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 TMBIM4Q9HC24 238 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 DEPPQ9NTK1 212 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 CNIH4Q9P003 139 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 SH3BP4Q9P0V3 963 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 BAIAP2L1Q9UHR4 511 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 ZNF639Q9UID6 485 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 SH3BGRL2Q9UJC5 107 aa13.11□□□□□ -0.31
VAMP4-203ENST00000474047 CLEC18AA5D8T8 446 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 FAM166BA8MTA8 275 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 MYO1GB0I1T2 1018 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 HS6ST1O60243 411 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 DHRS4L1P0CG22 281 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 ABOP16442 354 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 SDC1P18827 310 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 TACR1P25103 407 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 ARRB2P32121 409 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 ZNF628Q5EBL2 1059 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 RNFT1Q5M7Z0 435 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 C1QL3Q5VWW1 255 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 PAOXQ6QHF9 649 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 CLEC18BQ6UXF7 455 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 RGS9BPQ6ZS82 235 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 FJX1Q86VR8 437 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 SLC22A16Q86VW1 577 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 PRR22Q8IZ63 422 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 ZNF441Q8N8Z8 693 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 FNDC5Q8NAU1 212 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 CLEC18CQ8NCF0 446 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 C17orf47Q8NEP4 570 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 OR10G3Q8NGC4 313 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 OR6Y1Q8NGX8 325 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.1□□□□□ -0.316e-8■■■■■ 27.1
VAMP4-203ENST00000474047 DIO2Q92813 273 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 LCORQ96JN0 433 aaPredicted RBP13.1□□□□□ -0.31
VAMP4-203ENST00000474047 JSRP1Q96MG2 331 aaPredicted RBP13.1□□□□□ -0.31
VAMP4-203ENST00000474047 ITPAQ9BY32 194 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 NXF5Q9H1B4 397 aaKnown RBP13.1□□□□□ -0.31
VAMP4-203ENST00000474047 REEP4Q9H6H4 257 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 TAS2R9Q9NYW1 312 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 TAS2R7Q9NYW3 318 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 ERRFI1Q9UJM3 462 aaPredicted RBP13.1□□□□□ -0.31
VAMP4-203ENST00000474047 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.1□□□□□ -0.31
VAMP4-203ENST00000474047 RAP2CQ9Y3L5 183 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 PDPK1O15530 556 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 CBX7O95931 251 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 STSP08842 583 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 GPC1P35052 558 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 PIGAP37287 484 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 DNASE1L1P49184 302 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 RPL14P50914 215 aaKnown RBP13.1□□□□□ -0.31
VAMP4-203ENST00000474047 FBXW4P57775 412 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 PDCD2Q16342 344 aaPredicted RBP13.1□□□□□ -0.31
VAMP4-203ENST00000474047 PRAMEF20Q5VT98 475 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 LYPD8Q6UX82 237 aa13.1□□□□□ -0.31
VAMP4-203ENST00000474047 BNC2Q6ZN30 1099 aaPredicted RBP13.1□□□□□ -0.31
VAMP4-203ENST00000474047 R3HCC1LQ7Z5L2 792 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms