RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 MC3RP41968 323 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 IDH3AP50213 366 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 HLCSP50747 726 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 NR0B1P51843 470 aaKnown RBP11.5□□□□□ -0.57
DDX56-209ENST00000473924 CLNS1AP54105 237 aaKnown RBP11.5□□□□□ -0.57
DDX56-209ENST00000473924 NME5P56597 212 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 C21orf58P58505 322 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 OR1C1Q15619 314 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 MPEG1Q2M385 716 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 LSM12Q3MHD2 195 aaKnown RBP11.5□□□□□ -0.57
DDX56-209ENST00000473924 PLEKHN1Q494U1 663 aaPredicted RBP11.5□□□□□ -0.57
DDX56-209ENST00000473924 SPINK14Q6IE38 97 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 PRICKLE2Q7Z3G6 844 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 SZRD1Q7Z422 152 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 RIMKLAQ8IXN7 391 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 TAGAPQ8N103 731 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 OR7G2Q8NG99 324 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 TMEM125Q96AQ2 219 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 COQ8BQ96D53 544 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 MARK4Q96L34 752 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 RASL10BQ96S79 203 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 ZBTB18Q99592 522 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 DUSP26Q9BV47 211 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 BHLHE41Q9C0J9 482 aaPredicted RBP11.5□□□□□ -0.57
DDX56-209ENST00000473924 ANKRA2Q9H9E1 313 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 NPHS2Q9NP85 383 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 TCF7L2Q9NQB0 619 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 ACSS1Q9NUB1 689 aaPredicted RBP11.5□□□□□ -0.57
DDX56-209ENST00000473924 DDX18Q9NVP1 670 aaKnown RBP11.5□□□□□ -0.57
DDX56-209ENST00000473924 HPF1Q9NWY4 346 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 TAS2R9Q9NYW1 312 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 ERVK-11Q9UQG0 969 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 A0A087WV62 115 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 E9PBE3 544 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 PLOD2O00469 737 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 CFLARO15519 480 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 PLOD3O60568 738 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 COQ9O75208 318 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 CD46P15529 392 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 GPX3P22352 226 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 TRHRP34981 398 aaPredicted RBP11.49□□□□□ -0.57
DDX56-209ENST00000473924 SOX18P35713 384 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 SOX3P41225 446 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 FRKP42685 505 aaPredicted RBP11.49□□□□□ -0.57
DDX56-209ENST00000473924 NRG3P56975 720 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 UFM1P61960 85 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 SRSF11Q05519 484 aaKnown RBP11.49□□□□□ -0.57
DDX56-209ENST00000473924 GSTA3Q16772 222 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 DPY19L1Q2PZI1 675 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 PIGGQ5H8A4 983 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 ZNF468Q5VIY5 522 aaPredicted RBP11.49□□□□□ -0.57
DDX56-209ENST00000473924 TMEM198Q66K66 360 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 OPN5Q6U736 354 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 IL20RBQ6UXL0 311 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 GPALPP1Q8IXQ4 340 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 CYP4Z2PQ8N1L4 340 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 SLC15A4Q8N697 577 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 SIMC1Q8NDZ2 872 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 NUDT8Q8WV74 236 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 TP53INP1Q96A56 240 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 ELP4Q96EB1 424 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 C5orf34Q96MH7 638 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 RILPQ96NA2 401 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 SIGLEC12Q96PQ1 595 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 EBF4Q9BQW3 602 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 ITPAQ9BY32 194 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 KLHL1Q9NR64 748 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 MAP10Q9P2G4 905 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 DCTN4Q9UJW0 460 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 GPR45Q9Y5Y3 372 aa11.49□□□□□ -0.57
DDX56-209ENST00000473924 TLN1Q9Y490 2541 aaKnown RBP11.48□□□□□ -0.57
DDX56-209ENST00000473924 UPK1AO00322 258 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 ANKRD28O15084 1053 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 SUV39H1O43463 412 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 SLC25A12O75746 678 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 OR6B1O95007 311 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 ABCB1P08183 1280 aaPredicted RBP11.48□□□□□ -0.57
DDX56-209ENST00000473924 TROVE2P10155 538 aaKnown RBP eCLIP11.48□□□□□ -0.57
DDX56-209ENST00000473924 S100A3P33764 101 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 KIR3DL1P43629 444 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 EMDP50402 254 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 CDK9P50750 372 aaKnown RBP11.48□□□□□ -0.57
DDX56-209ENST00000473924 PRKAG1P54619 331 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 STX1BP61266 288 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 DCAF7P61962 342 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 ZNF155Q12901 538 aaPredicted RBP11.48□□□□□ -0.57
DDX56-209ENST00000473924 DUSP8Q13202 625 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 MLC1Q15049 377 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 NNATQ16517 81 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 MAPKAPK3Q16644 382 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 FAM174BQ3ZCQ3 159 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 ZNF766Q5HY98 468 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 FHL5Q5TD97 284 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 OR4F3Q6IEY1 312 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 CAMKMTQ7Z624 323 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 TMEM178AQ8NBL3 297 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 MDS2Q8NDY4 140 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 VPS37AQ8NEZ2 397 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 OR5P2Q8WZ92 322 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 ADIPOR1Q96A54 375 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms