RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 MLKLQ8NB16 471 aa5.1□□□□□ -1.59
SEC22A-204ENST00000473494 FAM71CQ8NEG0 241 aa5.1□□□□□ -1.59
SEC22A-204ENST00000473494 PCNPQ8WW12 178 aaKnown RBP5.1□□□□□ -1.59
SEC22A-204ENST00000473494 TMEM37Q8WXS4 190 aa5.1□□□□□ -1.59
SEC22A-204ENST00000473494 PHYHIPQ92561 330 aa5.1□□□□□ -1.59
SEC22A-204ENST00000473494 SLC45A3Q96JT2 553 aa5.1□□□□□ -1.59
SEC22A-204ENST00000473494 RAB17Q9H0T7 212 aa5.1□□□□□ -1.59
SEC22A-204ENST00000473494 HECW2Q9P2P5 1572 aa5.1□□□□□ -1.59
SEC22A-204ENST00000473494 ZNF490Q9ULM2 529 aaPredicted RBP5.1□□□□□ -1.59
SEC22A-204ENST00000473494 KLHDC2Q9Y2U9 406 aa5.1□□□□□ -1.59
SEC22A-204ENST00000473494 ZNF175Q9Y473 711 aa5.1□□□□□ -1.59
SEC22A-204ENST00000473494 SUPT6HQ7KZ85 1726 aaKnown RBP5.09□□□□□ -1.59
SEC22A-204ENST00000473494 ATP10AO60312 1499 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 LRRC9Q6ZRR7 1453 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 MBD5Q9P267 1494 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 CCNB3Q8WWL7 1395 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 FAM205AQ6ZU69 1335 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 IGLON5A6NGN9 336 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 PTBP3O95758 552 aaKnown RBP5.09□□□□□ -1.59
SEC22A-204ENST00000473494 ZCCHC18P0CG32 403 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 GHRP10912 638 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 GP9P14770 177 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 FUT1P19526 365 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 HSPA1LP34931 641 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 ID1P41134 155 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 ZNF131P52739 623 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 FUT7Q11130 342 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 HKDC1Q2TB90 917 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 ACSF3Q4G176 576 aaPredicted RBP5.09□□□□□ -1.59
SEC22A-204ENST00000473494 FAM182AQ5T1J6 154 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 WDR25Q64LD2 544 aaPredicted RBP5.09□□□□□ -1.59
SEC22A-204ENST00000473494 RAET1GQ6H3X3 334 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 RNF130Q86XS8 419 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 LINC00518Q8N0U6 118 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 ZNF781Q8N8C0 355 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 OR1B1Q8NGR6 318 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 MIPOL1Q8TD10 442 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 TBC1D31Q96DN5 1066 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 DEFB118Q96PH6 123 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 ATF6BQ99941 703 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 TUBGCP4Q9UGJ1 667 aa5.09□□□□□ -1.59
SEC22A-204ENST00000473494 ZNF518AQ6AHZ1 1483 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 NEDD8-MDP1E9PL57 170 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 H7C423 109 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 DUSP11O75319 330 aaKnown RBP5.08□□□□□ -1.6
SEC22A-204ENST00000473494 CCDC159P0C7I6 412 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 PRDX2P32119 198 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 SPP2Q13103 211 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 CEBPEQ15744 281 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 INAQ16352 499 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 SHROOM1Q2M3G4 852 aaPredicted RBP5.08□□□□□ -1.6
SEC22A-204ENST00000473494 UNC50Q53HI1 259 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 UNC5DQ6UXZ4 953 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 BANPQ8N9N5 519 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 ZNRF1Q8ND25 227 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 ZNF397Q8NF99 534 aaPredicted RBP5.08□□□□□ -1.6
SEC22A-204ENST00000473494 FBXO25Q8TCJ0 367 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 RSPH1Q8WYR4 309 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 TAF4BQ92750 862 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 AGAP3Q96P47 875 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 WRAP53Q9BUR4 548 aaKnown RBP5.08□□□□□ -1.6
SEC22A-204ENST00000473494 NLNQ9BYT8 704 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 LIME1Q9H400 295 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 Q9HAA7 133 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 CTSZQ9UBR2 303 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 BCAP29Q9UHQ4 241 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 SPATA2Q9UM82 520 aa5.08□□□□□ -1.6
SEC22A-204ENST00000473494 INO80Q9ULG1 1556 aaPredicted RBP5.08□□□□□ -1.6
SEC22A-204ENST00000473494 HCFC1P51610 2035 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 CAMSAP2Q08AD1 1489 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 MLH3Q9UHC1 1453 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 C9orf84Q5VXU9 1444 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 A0A0A6YYD4 124 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 TRGV8A0A0C4DH27 118 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 ASB14A6NK59 587 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 SORBS2O94875 1100 aaKnown RBP5.07□□□□□ -1.6
SEC22A-204ENST00000473494 IL4RP24394 825 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 MATKP42679 507 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 HSPA2P54652 639 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 NDUFV3P56181 108 aaKnown RBP5.07□□□□□ -1.6
SEC22A-204ENST00000473494 ERVK11-1P61568 191 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 GABPB1Q06547 395 aaPredicted RBP5.07□□□□□ -1.6
SEC22A-204ENST00000473494 ENPP2Q13822 863 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 DPYSQ14117 519 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 SIX1Q15475 284 aaPredicted RBP5.07□□□□□ -1.6
SEC22A-204ENST00000473494 CCL14Q16627 93 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 LRIT3Q3SXY7 679 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 CEP85LQ5SZL2 805 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 ISLR2Q6UXK2 745 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 DPY19L2P2Q6ZN68 376 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 ZNF497Q6ZNH5 498 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 TMEM26Q6ZUK4 368 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 CERS5Q8N5B7 392 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 NPRL2Q8WTW4 380 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 TAF15Q92804 592 aaKnown RBP eCLIP5.07□□□□□ -1.6
SEC22A-204ENST00000473494 CCDC51Q96ER9 411 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 C18orf12Q96KH6 178 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 CPXM1Q96SM3 734 aa5.07□□□□□ -1.6
SEC22A-204ENST00000473494 C19orf43Q9BQ61 176 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms