RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 TP53BP2Q13625 1128 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 GNA13Q14344 377 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 NDUFA9Q16795 377 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 C6orf52Q5T4I8 152 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 ARHGAP22Q7Z5H3 698 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 OR5K1Q8NHB7 308 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 SUN3Q8TAQ9 357 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 KLHL6Q8WZ60 621 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 PMEPA1Q969W9 287 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 SLC35G5Q96KT7 338 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 C10orf90Q96M02 699 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 DPYSL5Q9BPU6 564 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 ANKHQ9HCJ1 492 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 FAM60AQ9NP50 221 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 PDP2Q9P2J9 529 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 PLCL2Q9UPR0 1127 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 USP24Q9UPU5 2620 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 WASHC1A8K0Z3 465 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 EFCAB7A8K855 629 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 TMX2-CTNND1H3BSU7 103 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 EI24O14681 340 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 EMC8O43402 210 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 GCM2O75603 506 aaPredicted RBP16.4■□□□□ 0.22
HSPG2-208ENST00000471322 HPRP00739 348 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 FEN1P39748 380 aaKnown RBP16.4■□□□□ 0.22
HSPG2-208ENST00000471322 KHKP50053 298 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 ALDH3A2P51648 485 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 ARHGDIAP52565 204 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 PCBP3P57721 371 aaKnown RBP16.4■□□□□ 0.22
HSPG2-208ENST00000471322 BLMHQ13867 455 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 PRTGQ2VWP7 1150 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 NHSL2Q5HYW2 709 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 OR2T5Q6IEZ7 315 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 HIPK1Q86Z02 1210 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 LRRC25Q8N386 305 aaPredicted RBP16.4■□□□□ 0.22
HSPG2-208ENST00000471322 HORMAD2Q8N7B1 307 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 AGBL5Q8NDL9 886 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 OR2T29Q8NH02 315 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 ZCCHC14Q8WYQ9 949 aaKnown RBP16.4■□□□□ 0.22
HSPG2-208ENST00000471322 TANKQ92844 425 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 TPD52L3Q96J77 140 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 RDH12Q96NR8 316 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 SLC46A1Q96NT5 459 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 CLK4Q9HAZ1 481 aaKnown RBP16.4■□□□□ 0.22
HSPG2-208ENST00000471322 AKAP7Q9P0M2 348 aaPredicted RBP16.4■□□□□ 0.22
HSPG2-208ENST00000471322 SCOCQ9UIL1 159 aa16.4■□□□□ 0.22
HSPG2-208ENST00000471322 SNRNP200O75643 2136 aaKnown RBP16.4■□□□□ 0.22
HSPG2-208ENST00000471322 M0QX08 132 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 E2F6O75461 281 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 TFPTP0C1Z6 253 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 MATN1P21941 496 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 RBMS1P29558 406 aaKnown RBP16.39■□□□□ 0.21
HSPG2-208ENST00000471322 AQP1P29972 269 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 XKP51811 444 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 TRA2AQ13595 282 aaKnown RBP eCLIP16.39■□□□□ 0.21
HSPG2-208ENST00000471322 DAG1Q14118 895 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 KCNAB1Q14722 419 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 TCTE1Q5JU00 501 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 GARNL3Q5VVW2 1013 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 TNFAIP8L2Q6P589 184 aaPredicted RBP16.39■□□□□ 0.21
HSPG2-208ENST00000471322 STK32CQ86UX6 486 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 MIPOL1Q8TD10 442 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 TFAP2CQ92754 450 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 ZNF285Q96NJ3 590 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 CTRCQ99895 268 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 PDE7BQ9NP56 450 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 WDR70Q9NW82 654 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 SMPD3Q9NY59 655 aaPredicted RBP16.39■□□□□ 0.21
HSPG2-208ENST00000471322 IFT80Q9P2H3 777 aaPredicted RBP16.39■□□□□ 0.21
HSPG2-208ENST00000471322 P2RX2Q9UBL9 471 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 PADI2Q9Y2J8 665 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 NAALAD2Q9Y3Q0 740 aa16.39■□□□□ 0.21
HSPG2-208ENST00000471322 HMGN4O00479 90 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 B4GALT2O60909 372 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 SLITRK5O94991 958 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 LYNP07948 512 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 C8orf89P0DMQ9 161 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 ITGA2P17301 1181 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 PPP2R1BP30154 601 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 CHN2P52757 468 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 CRYBA2P53672 197 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 ARSFP54793 590 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 KCNJ10P78508 379 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 EIF3IQ13347 325 aaKnown RBP16.38■□□□□ 0.21
HSPG2-208ENST00000471322 IFI44LQ53G44 452 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 VTCN1Q7Z7D3 282 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 ARMC8Q8IUR7 673 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 OR10Q1Q8NGQ4 319 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 MAGEE2Q8TD90 523 aaPredicted RBP16.38■□□□□ 0.21
HSPG2-208ENST00000471322 SLC38A5Q8WUX1 472 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 ELP4Q96EB1 424 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 NRBF2Q96F24 287 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 ZNF607Q96SK3 696 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 RBM4BQ9BQ04 359 aaKnown RBP16.38■□□□□ 0.21
HSPG2-208ENST00000471322 RBM4Q9BWF3 364 aaKnown RBP16.38■□□□□ 0.21
HSPG2-208ENST00000471322 ASCL3Q9NQ33 180 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 MRPS2Q9Y399 296 aaKnown RBP16.38■□□□□ 0.21
HSPG2-208ENST00000471322 PCDHGA8Q9Y5G5 932 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 MDC1Q14676 2089 aaKnown RBP16.38■□□□□ 0.21
HSPG2-208ENST00000471322 AHCTF1Q8WYP5 2266 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms