RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 VPS36Q86VN1 386 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 UNC93AQ86WB7 457 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 METTL23Q86XA0 190 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 ZNF677Q86XU0 584 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 LGI2Q8N0V4 545 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 NUP93Q8N1F7 819 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 TMEM86AQ8N2M4 240 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 C17orf47Q8NEP4 570 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 OR5T2Q8NGG2 359 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 GOT1L1Q8NHS2 421 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-202ENST00000471307 PHOSPHO2Q8TCD6 241 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 PTERQ96BW5 349 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 NXNL1Q96CM4 212 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 THOC1Q96FV9 657 aaKnown RBP4.51□□□□□ -1.69
CCDC39-202ENST00000471307 SENP8Q96LD8 212 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 CCDC42Q96M95 316 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 ZNF830Q96NB3 372 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-202ENST00000471307 CHP1Q99653 195 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 CITED2Q99967 270 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-202ENST00000471307 TMEM175Q9BSA9 504 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 GPR88Q9GZN0 384 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 HOXD1Q9GZZ0 328 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 MTIF3Q9H2K0 278 aaKnown RBP4.51□□□□□ -1.69
CCDC39-202ENST00000471307 ANKZF1Q9H8Y5 726 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 NHEJ1Q9H9Q4 299 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-202ENST00000471307 CISHQ9NSE2 258 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 TBC1D13Q9NVG8 400 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 FAM120CQ9NX05 1096 aaKnown RBP4.51□□□□□ -1.69
CCDC39-202ENST00000471307 BARX2Q9UMQ3 279 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-202ENST00000471307 TMED3Q9Y3Q3 217 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 WIPI2Q9Y4P8 454 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 ZFP37Q9Y6Q3 630 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-202ENST00000471307 CEP290O15078 2479 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 LTBP2Q14767 1821 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 CASTOR2A6NHX0 329 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 CYB561D2O14569 222 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 MED7O43513 233 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 TADA2AO75478 443 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 B3GAT3O94766 335 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 PGM3O95394 542 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 LCA5LO95447 670 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 CCDC175P0C221 793 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 ODC1P11926 461 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 GZMAP12544 262 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 IRF2P14316 349 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 CYP11B1P15538 503 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 WARSP23381 471 aaKnown RBP4.5□□□□□ -1.69
CCDC39-202ENST00000471307 MPZP25189 248 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 OR1G1P47890 313 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 CCZ1BP86790 482 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 CCZ1P86791 482 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-202ENST00000471307 SPA17Q15506 151 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 PPP1R2P3Q6NXS1 205 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 TMEM270Q6UE05 265 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 NUP54Q7Z3B4 507 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 DNAJB7Q7Z6W7 309 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-202ENST00000471307 CATSPERDQ86XM0 798 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 LRRC43Q8N309 656 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 LINC00612Q8N6U2 182 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 SLC37A3Q8NCC5 494 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 MIPOL1Q8TD10 442 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 ZNF606Q8WXB4 792 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 RMDN1Q96DB5 314 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 SLC45A3Q96JT2 553 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 AGPAT1Q99943 283 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 SNX25Q9H3E2 840 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 HAUS4Q9H6D7 363 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 TLE6Q9H808 572 aa4.5□□□□□ -1.69
CCDC39-202ENST00000471307 A0A087X0T9 212 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 A8MXQ7 604 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 ZSCAN12O43309 604 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 RTN2O75298 545 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 GJB5O95377 273 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 TGDSO95455 350 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 ABCB1P08183 1280 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-202ENST00000471307 PLEKP08567 350 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-202ENST00000471307 FAM228BP0C875 321 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 PNMA6AP0CW24 399 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-202ENST00000471307 RPL35AP18077 110 aaKnown RBP4.49□□□□□ -1.69
CCDC39-202ENST00000471307 AZU1P20160 251 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 SLC11A1P49279 550 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 ZNF41P51814 821 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-202ENST00000471307 NDST1P52848 882 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 MAPK12P53778 367 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 DEFB103AP81534 67 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 BTG3Q14201 252 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-202ENST00000471307 TAB1Q15750 504 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 WSCD1Q658N2 575 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 ALKBH5Q6P6C2 394 aaKnown RBP4.49□□□□□ -1.69
CCDC39-202ENST00000471307 CD300LGQ6UXG3 332 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 SCARA5Q6ZMJ2 495 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 ZNF571Q7Z3V5 609 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-202ENST00000471307 SLC47A2Q86VL8 602 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 GPR65Q8IYL9 337 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 THEM5Q8N1Q8 247 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 SLC39A11Q8N1S5 342 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 PDCL2Q8N4E4 241 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 SLC4A11Q8NBS3 891 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 OR4K1Q8NGD4 311 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 GDAP1Q8TB36 358 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms