RNA–Protein interactions for RNA: ENST00000470271.5

CTPS1-206, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-206ENST00000470271 TMEM114B3SHH9 223 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 G3V3Y1 287 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 TFECO14948 347 aaPredicted RBP18.35■□□□□ 0.53
CTPS1-206ENST00000470271 ASNA1O43681 348 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 CCL3P10147 92 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 CNR1P21554 472 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 NRG3P56975 720 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 DUSP8Q13202 625 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 GALNTL6Q49A17 601 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 C4orf17Q53FE4 359 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 CES4AQ5XG92 561 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 SLC22A10Q63ZE4 541 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 FAM9CQ8IZT9 166 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 FAM13CQ8NE31 585 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 ERP27Q96DN0 273 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 EGLN2Q96KS0 407 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 FAM173AQ9BQD7 235 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 SH2D2AQ9NP31 389 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 PRODH2Q9UF12 536 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 EXO1Q9UQ84 846 aaKnown RBP18.35■□□□□ 0.53
CTPS1-206ENST00000470271 DTX4Q9Y2E6 619 aa18.35■□□□□ 0.53
CTPS1-206ENST00000470271 SPTAN1Q13813 2472 aaKnown RBP18.35■□□□□ 0.53
CTPS1-206ENST00000470271 DIDO1Q9BTC0 2240 aaKnown RBP18.35■□□□□ 0.53
CTPS1-206ENST00000470271 USP9YO00507 2555 aaPredicted RBP18.35■□□□□ 0.53
CTPS1-206ENST00000470271 A0A0G2JMM0 328 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 A0A1W2PPB8 328 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 A0A1W2PRS3 328 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 PINLYPA6NC86 204 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 KIR3DP1A8MWS1 328 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 MYO1GB0I1T2 1018 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 ITM2AO43736 263 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 LYPLA1O75608 230 aaPredicted RBP18.34■□□□□ 0.53
CTPS1-206ENST00000470271 BCAS2O75934 225 aaPredicted RBP18.34■□□□□ 0.53
CTPS1-206ENST00000470271 SDC1P18827 310 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 ABCE1P61221 599 aaKnown RBP18.34■□□□□ 0.53
CTPS1-206ENST00000470271 NTRK2Q16620 822 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 PRSS53Q2L4Q9 553 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.34■□□□□ 0.53
CTPS1-206ENST00000470271 XKR7Q5GH72 579 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 GK5Q6ZS86 529 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 FAM47EQ6ZV65 393 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 SIMC1Q8NDZ2 872 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 OR10G3Q8NGC4 313 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 PAQR8Q8TEZ7 354 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 KAT2AQ92830 837 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 PPP3R2Q96LZ3 170 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 ITPAQ9BY32 194 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 NPFFR2Q9Y5X5 522 aa18.34■□□□□ 0.53
CTPS1-206ENST00000470271 SPTBN1Q01082 2364 aaKnown RBP18.34■□□□□ 0.53
CTPS1-206ENST00000470271 LRRTM2O43300 516 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 HS6ST1O60243 411 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 SKAP2O75563 359 aaPredicted RBP18.33■□□□□ 0.52
CTPS1-206ENST00000470271 SNUPNO95149 360 aaKnown RBP18.33■□□□□ 0.52
CTPS1-206ENST00000470271 JUNP05412 331 aaKnown RBP18.33■□□□□ 0.52
CTPS1-206ENST00000470271 GRK2P25098 689 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 NTSP30990 170 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 TMED10P49755 219 aaKnown RBP18.33■□□□□ 0.52
CTPS1-206ENST00000470271 EMDP50402 254 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 NCBP2P52298 156 aaKnown RBP eCLIP18.33■□□□□ 0.52
CTPS1-206ENST00000470271 PLGLB1Q02325 96 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 CASP8Q14790 479 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 HHATQ5VTY9 493 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 TMEM64Q6YI46 380 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 BNC2Q6ZN30 1099 aaPredicted RBP18.33■□□□□ 0.52
CTPS1-206ENST00000470271 GHDCQ8N2G8 530 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 ANKRD42Q8N9B4 389 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 OR5M3Q8NGP4 307 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 GFM2Q969S9 779 aaKnown RBP18.33■□□□□ 0.52
CTPS1-206ENST00000470271 C3orf30Q96M34 536 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 TSSK3Q96PN8 268 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 PAIP2Q9BPZ3 127 aaKnown RBP18.33■□□□□ 0.52
CTPS1-206ENST00000470271 NXF5Q9H1B4 397 aaKnown RBP18.33■□□□□ 0.52
CTPS1-206ENST00000470271 ZNF395Q9H8N7 513 aaPredicted RBP18.33■□□□□ 0.52
CTPS1-206ENST00000470271 ANKRA2Q9H9E1 313 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 TMBIM4Q9HC24 238 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 CNIH4Q9P003 139 aa18.33■□□□□ 0.52
CTPS1-206ENST00000470271 GTF3C1Q12789 2109 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 SETXQ7Z333 2677 aaKnown RBP18.32■□□□□ 0.52
CTPS1-206ENST00000470271 A0A1B0GUH1 482 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 ATP6AP2A0A1C7CYW4 349 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 TMEM120BA0PK00 339 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 ACOT7O00154 380 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 TP53I11O14683 189 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 PLOD3O60568 738 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 PEX11AO75192 247 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 ATP6AP2O75787 350 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 RNF224P0DH78 156 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 BGNP21810 368 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 ABCD3P28288 659 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 MAPK1P28482 360 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 DNASE1L1P49184 302 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 MAGOHP61326 146 aaKnown RBP18.32■□□□□ 0.52
CTPS1-206ENST00000470271 DCAF7P61962 342 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 PPIAP62937 165 aaKnown RBP18.32■□□□□ 0.52
CTPS1-206ENST00000470271 RPS6KA2Q15349 733 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 NNATQ16517 81 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 ATP6AP1LQ52LC2 224 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 C1QL3Q5VWW1 255 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 RGS9BPQ6ZS82 235 aa18.32■□□□□ 0.52
CTPS1-206ENST00000470271 FBXW8Q8N3Y1 598 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms