RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 CD274Q9NZQ7 290 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 ANK3Q12955 4377 aaKnown RBP17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 CBR3O75828 277 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 ABCB1P08183 1280 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 TCEA1P23193 301 aaKnown RBP17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 ABCD3P28288 659 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 SLC12A2P55011 1212 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 SIRPAP78324 504 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 PPP1R7Q15435 360 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 CLEC12BQ2HXU8 276 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 MSS51Q4VC12 460 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 RNASEH2BQ5TBB1 312 aaKnown RBP17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 SULT1C3Q6IMI6 304 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 SLC30A6Q6NXT4 461 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 AAGABQ6PD74 315 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 ZNF474Q6S9Z5 364 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 BTLAQ7Z6A9 289 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 SPATA6LQ8N4H0 392 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 G6PC3Q9BUM1 346 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 KLHL4Q9C0H6 718 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 GALNT9Q9HCQ5 603 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 ELOVL5Q9NYP7 299 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 TAS2R10Q9NYW0 307 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 CUBNO60494 3623 aa17.19■□□□□ 0.34
NCKIPSD-209ENST00000470006 A0A087X1B8 175 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 HAX1O00165 279 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 ICOSLGO75144 302 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 S100BP04271 92 aaPredicted RBP17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 SLC35E2BP0CK96 405 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 SLC35E2P0CK97 266 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 GGT5P36269 586 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 NNATQ16517 81 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 DEPDC1Q5TB30 811 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 OR2A2Q6IF42 318 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 CYP20A1Q6UW02 462 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 GALNT12Q8IXK2 581 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 RNF175Q8N4F7 328 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 EXT2Q93063 718 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 SFXN2Q96NB2 322 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 OR10A5Q9H207 317 aa17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 EXO1Q9UQ84 846 aaKnown RBP17.18■□□□□ 0.34
NCKIPSD-209ENST00000470006 PPM1BO75688 479 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 CRHP06850 196 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 NR2F6P10588 404 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 PAX1P15863 534 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 GALNSP34059 522 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 CASP2P42575 452 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 LHX2P50458 406 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 TBCCQ15814 346 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 CHRFAM7AQ494W8 412 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 DESI1Q6ICB0 168 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 HIPK1Q86Z02 1210 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 OR7G3Q8NG95 312 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 GRK7Q8WTQ7 553 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 ADIPOR1Q96A54 375 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 ZNF845Q96IR2 970 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 NODALQ96S42 347 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 REG4Q9BYZ8 158 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 OR2B2Q9GZK3 357 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 CXorf21Q9HAI6 301 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 ZNF701Q9NV72 531 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 CHMP2BQ9UQN3 213 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 DLGAP4Q9Y2H0 992 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 PSAT1Q9Y617 370 aa17.17■□□□□ 0.34
NCKIPSD-209ENST00000470006 UQCRHLA0A096LP55 91 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 SLC22A20A6NK97 555 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 PLPP1O14494 284 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 PHF1O43189 567 aaPredicted RBP17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 RHOXF2BP0C7M4 288 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 CNTFP26441 200 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 PIK3R1P27986 724 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 SERPINB1P30740 379 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 ELK3P41970 407 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 PCYT1AP49585 367 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 CAPRIN1Q14444 709 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 ZNF704Q6ZNC4 412 aaPredicted RBP17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 NUP54Q7Z3B4 507 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 ZC3HC1Q86WB0 502 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 MYLK4Q86YV6 388 aaPredicted RBP17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 ZCCHC7Q8N3Z6 543 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 SPC24Q8NBT2 197 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 MS4A14Q96JA4 679 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 DERL2Q9GZP9 239 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 NXF5Q9H1B4 397 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 LYARQ9NX58 379 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 EHD3Q9NZN3 535 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 ASIC3Q9UHC3 531 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 ADGRE2Q9UHX3 823 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 DKKL1Q9UK85 242 aa17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 PTBP2Q9UKA9 531 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-209ENST00000470006 A0A1W2PR48 441 aa17.15■□□□□ 0.34
NCKIPSD-209ENST00000470006 TLX2O43763 284 aaPredicted RBP17.15■□□□□ 0.34
NCKIPSD-209ENST00000470006 F12P00748 615 aaPredicted RBP17.15■□□□□ 0.34
NCKIPSD-209ENST00000470006 CT62P0C5K7 136 aa17.15■□□□□ 0.34
NCKIPSD-209ENST00000470006 FAM58BPP0C7Q3 252 aa17.15■□□□□ 0.34
NCKIPSD-209ENST00000470006 EPORP19235 508 aa17.15■□□□□ 0.34
NCKIPSD-209ENST00000470006 NT5EP21589 574 aa17.15■□□□□ 0.34
NCKIPSD-209ENST00000470006 LOXP28300 417 aaPredicted RBP17.15■□□□□ 0.34
NCKIPSD-209ENST00000470006 CCKARP32238 428 aa17.15■□□□□ 0.34
NCKIPSD-209ENST00000470006 GFRA1P56159 465 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms