RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 VPS29Q9UBQ0 182 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 DLGAP4Q9Y2H0 992 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 DNAJB6O75190 326 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 CDC123O75794 336 aaPredicted RBP16.48■□□□□ 0.23
MRPL28-208ENST00000469744 C8orf89P0DMQ9 161 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 HOXB6P17509 224 aaKnown RBP16.48■□□□□ 0.23
MRPL28-208ENST00000469744 CD22P20273 847 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 PRPS1L1P21108 318 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 FASP25445 335 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 NEK2P51955 445 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 OLR1P78380 273 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 REEP5Q00765 189 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 PCOLCEQ15113 449 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 INTS11Q5TA45 600 aaKnown RBP16.48■□□□□ 0.23
MRPL28-208ENST00000469744 HMBOX1Q6NT76 420 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 Q6ZS92 163 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 FKBP9P1Q75LS8 142 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 ANKRD53Q8N9V6 530 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 BRIX1Q8TDN6 353 aaKnown RBP16.48■□□□□ 0.23
MRPL28-208ENST00000469744 APIPQ96GX9 242 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 ZNF597Q96LX8 424 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 WDR77Q9BQA1 342 aaPredicted RBP16.48■□□□□ 0.23
MRPL28-208ENST00000469744 GORASP2Q9H8Y8 452 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 SIRT5Q9NXA8 310 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 PTGFRNQ9P2B2 879 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 TSC22D4Q9Y3Q8 395 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 LOC102723996A0A087X1L8 192 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 MYO1DO94832 1006 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 SEC24DO94855 1032 aaPredicted RBP16.48■□□□□ 0.23
MRPL28-208ENST00000469744 ZNF888P0CJ79 500 aaPredicted RBP16.48■□□□□ 0.23
MRPL28-208ENST00000469744 GGT1P19440 569 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 SRSF11Q05519 484 aaKnown RBP16.48■□□□□ 0.23
MRPL28-208ENST00000469744 MRPL49Q13405 166 aaKnown RBP16.48■□□□□ 0.23
MRPL28-208ENST00000469744 LAPTM5Q13571 262 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 PDK3Q15120 406 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 RBBP5Q15291 538 aaKnown RBP16.48■□□□□ 0.23
MRPL28-208ENST00000469744 DEFB134Q4QY38 66 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 PPP4R4Q6NUP7 873 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 TMEM205Q6UW68 189 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 NXPE4Q6UWF7 544 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 IGFL2Q6UWQ7 119 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 ISLR2Q6UXK2 745 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 SLCO4C1Q6ZQN7 724 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 TBC1D19Q8N5T2 526 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 PSMF1Q92530 271 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 PEX11GQ96HA9 241 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 NSMCE2Q96MF7 247 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 EFCAB11Q9BUY7 163 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 SARGQ9BW04 601 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 PAIP1Q9H074 479 aaKnown RBP16.48■□□□□ 0.23
MRPL28-208ENST00000469744 EPS8L2Q9H6S3 715 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 PELI2Q9HAT8 420 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 AGPAT4Q9NRZ5 378 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 VAPAQ9P0L0 249 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 NTNG1Q9Y2I2 539 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 SLC22A7Q9Y694 548 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 HIVEP3Q5T1R4 2406 aa16.48■□□□□ 0.23
MRPL28-208ENST00000469744 A0A1W2PQ72 361 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 CLEC18AA5D8T8 446 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 GMNNO75496 209 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 TIPRLO75663 272 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 ITGAMP11215 1152 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 HOXB9P17482 250 aaPredicted RBP16.47■□□□□ 0.23
MRPL28-208ENST00000469744 ASMTP46597 345 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 TRPC1P48995 793 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 OR4D2P58180 307 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 PAGE2BQ5JRK9 111 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 GLYATQ6IB77 296 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 MED27Q6P2C8 311 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 CLEC18BQ6UXF7 455 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 IFNEQ86WN2 208 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 KRTCAP2Q8N6L1 136 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 CLEC18CQ8NCF0 446 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 METTL21AQ8WXB1 218 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 PPWD1Q96BP3 646 aaKnown RBP16.47■□□□□ 0.23
MRPL28-208ENST00000469744 C11orf24Q96F05 449 aaPredicted RBP16.47■□□□□ 0.23
MRPL28-208ENST00000469744 CENPNQ96H22 339 aaPredicted RBP16.47■□□□□ 0.23
MRPL28-208ENST00000469744 ZNF583Q96ND8 569 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 AIF1LQ9BQI0 150 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 OSBPL11Q9BXB4 747 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 ZNF700Q9H0M5 742 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 COQ10BQ9H8M1 238 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 PCDHGA10Q9Y5H3 936 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 AP4B1Q9Y6B7 739 aa16.47■□□□□ 0.23
MRPL28-208ENST00000469744 CPAMD8Q8IZJ3 1885 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 SVILO95425 2214 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 SPTBN1Q01082 2364 aaKnown RBP16.46■□□□□ 0.23
MRPL28-208ENST00000469744 FAM220BPB1ANY3 271 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 FOXE1O00358 373 aaPredicted RBP16.46■□□□□ 0.23
MRPL28-208ENST00000469744 AKAP10O43572 662 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 GALR3O60755 368 aaPredicted RBP16.46■□□□□ 0.23
MRPL28-208ENST00000469744 F10P00742 488 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 SERPINA7P05543 415 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 ALOX12P18054 663 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 RAB8AP61006 207 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 RGS1Q08116 209 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 MFAP5Q13361 173 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 SELPLGQ14242 412 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 CYP51A1Q16850 503 aa16.46■□□□□ 0.23
MRPL28-208ENST00000469744 SPIN4Q56A73 249 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms