RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 HSPB3Q12988 150 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 TUBA3CQ13748 450 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 TLR1Q15399 786 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 PGS1Q32NB8 556 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 PDCD4Q53EL6 469 aaKnown RBP11.07□□□□□ -0.64
VPS13D-204ENST00000469054 PIGGQ5H8A4 983 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 ZNF468Q5VIY5 522 aaPredicted RBP11.07□□□□□ -0.64
VPS13D-204ENST00000469054 HLA-DQA1Q5Y7H0 255 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 TUBA3EQ6PEY2 450 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 TMEM107Q6UX40 140 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 TMEM156Q8N614 296 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 C17orf47Q8NEP4 570 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 OR8J2Q8NGG1 315 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 C16orf52Q8NHV5 167 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 RFWD2Q8NHY2 731 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 OR5P2Q8WZ92 322 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 PNPLA2Q96AD5 504 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 TESCQ96BS2 214 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 ELP4Q96EB1 424 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 MARK4Q96L34 752 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 RASL10BQ96S79 203 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 UTP23Q9BRU9 249 aaKnown RBP11.07□□□□□ -0.64
VPS13D-204ENST00000469054 WWTR1Q9GZV5 400 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.07□□□□□ -0.64
VPS13D-204ENST00000469054 CLMPQ9H6B4 373 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 TRIM45Q9H8W5 580 aaPredicted RBP11.07□□□□□ -0.64
VPS13D-204ENST00000469054 ANKRA2Q9H9E1 313 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 NPHS2Q9NP85 383 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 FGFR1OP2Q9NVK5 253 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 ANKRD10Q9NXR5 420 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 B3GNT3Q9Y2A9 372 aa11.07□□□□□ -0.64
VPS13D-204ENST00000469054 TRAV17A0A0B4J275 112 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 E9PBE3 544 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 UPK1AO00322 258 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 TROVE2P10155 538 aaKnown RBP eCLIP11.06□□□□□ -0.64
VPS13D-204ENST00000469054 EFNA1P20827 205 aaPredicted RBP11.06□□□□□ -0.64
VPS13D-204ENST00000469054 GPX3P22352 226 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 IL12AP29459 219 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 CD96P40200 585 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 CASRP41180 1078 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 KIR3DL1P43629 444 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 HLCSP50747 726 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 CDK9P50750 372 aaKnown RBP11.06□□□□□ -0.64
VPS13D-204ENST00000469054 SSR4P51571 173 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 WNT3P56703 355 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 OC90Q02509 493 aaPredicted RBP11.06□□□□□ -0.64
VPS13D-204ENST00000469054 OR1C1Q15619 314 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 DPY19L1Q2PZI1 675 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 PLEKHN1Q494U1 663 aaPredicted RBP11.06□□□□□ -0.64
VPS13D-204ENST00000469054 SPANXN4Q5MJ08 99 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 FHL5Q5TD97 284 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 SLC6A19Q695T7 634 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 SPINK14Q6IE38 97 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 OR4F3Q6IEY1 312 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 OR2L13Q8N349 312 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 SLC15A4Q8N697 577 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 ZNF441Q8N8Z8 693 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 GLB1L3Q8NCI6 653 aaPredicted RBP11.06□□□□□ -0.64
VPS13D-204ENST00000469054 ASB15Q8WXK1 588 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 ADIPOR1Q96A54 375 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 TP53INP1Q96A56 240 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 MAGED4Q96JG8 741 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 TEX37Q96LM6 180 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 ZNF317Q96PQ6 595 aaPredicted RBP11.06□□□□□ -0.64
VPS13D-204ENST00000469054 ZBTB18Q99592 522 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 SDR39U1Q9NRG7 319 aaPredicted RBP11.06□□□□□ -0.64
VPS13D-204ENST00000469054 DDX18Q9NVP1 670 aaKnown RBP11.06□□□□□ -0.64
VPS13D-204ENST00000469054 TAS2R9Q9NYW1 312 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 ZIM2Q9NZV7 527 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 LRFN1Q9P244 771 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 ANAPC2Q9UJX6 822 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 C19orf53Q9UNZ5 99 aaPredicted RBP11.06□□□□□ -0.64
VPS13D-204ENST00000469054 DTX4Q9Y2E6 619 aa11.06□□□□□ -0.64
VPS13D-204ENST00000469054 BSNQ9UPA5 3926 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 A0A0G2JND7 137 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 PRSS51A0A1B0GVH4 220 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 A8MVJ9 347 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 RNASET2O00584 256 aaKnown RBP11.05□□□□□ -0.64
VPS13D-204ENST00000469054 ZNF354AO60765 605 aaPredicted RBP11.05□□□□□ -0.64
VPS13D-204ENST00000469054 SCN2BO60939 215 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 COQ9O75208 318 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 NME6O75414 186 aaPredicted RBP11.05□□□□□ -0.64
VPS13D-204ENST00000469054 SLC22A3O75751 556 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 C1QL1O75973 258 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 OR6B1O95007 311 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 NADKO95544 446 aaPredicted RBP11.05□□□□□ -0.64
VPS13D-204ENST00000469054 C6orf47O95873 294 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 S100A3P33764 101 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 PPICP45877 212 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 MRPL19P49406 292 aaKnown RBP11.05□□□□□ -0.64
VPS13D-204ENST00000469054 NR0B1P51843 470 aaKnown RBP11.05□□□□□ -0.64
VPS13D-204ENST00000469054 DCAF7P61962 342 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 PHC1P78364 1004 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 ZNF169Q14929 603 aaPredicted RBP11.05□□□□□ -0.64
VPS13D-204ENST00000469054 FAM174BQ3ZCQ3 159 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 ANXA8L1Q5VT79 327 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 CGB2Q6NT52 195 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 GPALPP1Q8IXQ4 340 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 TAGAPQ8N103 731 aa11.05□□□□□ -0.64
VPS13D-204ENST00000469054 MIER2Q8N344 545 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms