RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 RHOXF2Q9BQY4 288 aa19.99■□□□□ 0.79
TTC28-204ENST00000468807 ZNF225Q9UK10 706 aa19.99■□□□□ 0.79
TTC28-204ENST00000468807 ZNF780BQ9Y6R6 833 aa19.99■□□□□ 0.79
TTC28-204ENST00000468807 ANKRD17O75179 2603 aaKnown RBP19.99■□□□□ 0.79
TTC28-204ENST00000468807 TEP1Q99973 2627 aaKnown RBP19.99■□□□□ 0.79
TTC28-204ENST00000468807 EXPH5Q8NEV8 1989 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 A0A0G2JNJ9 132 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 MANBAO00462 879 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 DLX3O60479 287 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 GPX3P22352 226 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 ZFP36L2P47974 494 aaKnown RBP19.98■□□□□ 0.79
TTC28-204ENST00000468807 GPRIN3Q6ZVF9 776 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 PACS2Q86VP3 889 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 NEIL3Q8TAT5 605 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 METTL6Q8TCB7 284 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 SPPL2AQ8TCT8 520 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 ITPAQ9BY32 194 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 ACKR4Q9NPB9 350 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 QPCTLQ9NXS2 382 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 Q9UFV3 132 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 TBK1Q9UHD2 729 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 CES1P1Q9UKY3 287 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 DTX4Q9Y2E6 619 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 CELSR1Q9NYQ6 3014 aa19.98■□□□□ 0.79
TTC28-204ENST00000468807 TRIM3O75382 744 aaPredicted RBP19.97■□□□□ 0.79
TTC28-204ENST00000468807 SNX4O95219 450 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 GABRA1P14867 456 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 ATP5F1P24539 256 aaPredicted RBP19.97■□□□□ 0.79
TTC28-204ENST00000468807 ABCD3P28288 659 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 MSX1P28360 303 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 TFF3Q07654 80 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 LTB4RQ15722 352 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 PRICKLE4Q2TBC4 344 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 ACBD4Q8NC06 268 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 ZNF382Q96SR6 550 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 NXF5Q9H1B4 397 aaKnown RBP19.97■□□□□ 0.79
TTC28-204ENST00000468807 METTL7AQ9H8H3 244 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 MCCC2Q9HCC0 563 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 MAT2BQ9NZL9 334 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 UTS2RQ9UKP6 389 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 CFL2Q9Y281 166 aa19.97■□□□□ 0.79
TTC28-204ENST00000468807 ARHGAP21Q5T5U3 1957 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 GNG14A0A1W2PPG7 69 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 ANKRD33BA6NCL7 494 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 FOXO6A8MYZ6 492 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 PCDH7O60245 1069 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 ULK1O75385 1050 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 ATP1B1P05026 303 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 FAM153BP0C7A2 387 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 CHN1P15882 459 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 S1PR1P21453 382 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 ADH7P40394 386 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 CSTF3Q12996 717 aaKnown RBP19.96■□□□□ 0.79
TTC28-204ENST00000468807 DUSP8Q13202 625 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 SLC29A2Q14542 456 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 FAM153CQ494X1 144 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 WDR53Q7Z5U6 358 aaPredicted RBP19.96■□□□□ 0.79
TTC28-204ENST00000468807 LCA5Q86VQ0 697 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 SLC22A9Q8IVM8 553 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 C17orf47Q8NEP4 570 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 OR52R1Q8NGF1 315 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 GNRHR2Q96P88 292 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 ANGPTL4Q9BY76 406 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 PSMC3IPQ9P2W1 217 aaPredicted RBP19.96■□□□□ 0.79
TTC28-204ENST00000468807 PLLPQ9Y342 182 aa19.96■□□□□ 0.79
TTC28-204ENST00000468807 FAM47E-STBD1D6RA91 191 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 GNB5O14775 395 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 HOXD4P09016 255 aaPredicted RBP19.95■□□□□ 0.78
TTC28-204ENST00000468807 PYGBP11216 843 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 HSD3B1P14060 373 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 IGFBP2P18065 325 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 IMPDH1P20839 514 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 HSD3B2P26439 372 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 CASP3P42574 277 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 TRA2BP62995 288 aaKnown RBP19.95■□□□□ 0.78
TTC28-204ENST00000468807 MRPS35P82673 323 aaKnown RBP19.95■□□□□ 0.78
TTC28-204ENST00000468807 DUSP2Q05923 314 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 MAP4K2Q12851 820 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 GSPT2Q8IYD1 628 aaKnown RBP19.95■□□□□ 0.78
TTC28-204ENST00000468807 ULK2Q8IYT8 1036 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 SIMC1Q8NDZ2 872 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 CNRIP1Q96F85 164 aaPredicted RBP19.95■□□□□ 0.78
TTC28-204ENST00000468807 SECISBP2Q96T21 854 aaKnown RBP19.95■□□□□ 0.78
TTC28-204ENST00000468807 TREX2Q9BQ50 279 aaPredicted RBP19.95■□□□□ 0.78
TTC28-204ENST00000468807 ACPTQ9BZG2 426 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 EHD3Q9NZN3 535 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 MCM8Q9UJA3 840 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 DLGAP4Q9Y2H0 992 aa19.95■□□□□ 0.78
TTC28-204ENST00000468807 PPM1BO75688 479 aa19.94■□□□□ 0.78
TTC28-204ENST00000468807 IL3P08700 152 aa19.94■□□□□ 0.78
TTC28-204ENST00000468807 PCSK2P16519 638 aa19.94■□□□□ 0.78
TTC28-204ENST00000468807 HTR6P50406 440 aa19.94■□□□□ 0.78
TTC28-204ENST00000468807 PRKAA2P54646 552 aa19.94■□□□□ 0.78
TTC28-204ENST00000468807 HMGCS1Q01581 520 aa19.94■□□□□ 0.78
TTC28-204ENST00000468807 BTKQ06187 659 aa19.94■□□□□ 0.78
TTC28-204ENST00000468807 PLCXD2Q0VAA5 305 aa19.94■□□□□ 0.78
TTC28-204ENST00000468807 MGAT2Q10469 447 aa19.94■□□□□ 0.78
TTC28-204ENST00000468807 LCP2Q13094 533 aa19.94■□□□□ 0.78
TTC28-204ENST00000468807 MYBPHQ13203 477 aa19.94■□□□□ 0.78
TTC28-204ENST00000468807 TRMT12Q53H54 448 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms