RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 NECTIN3Q9NQS3 549 aa6.43□□□□□ -1.38
SCAF4-204ENST00000467731 GIMAP4Q9NUV9 329 aa6.43□□□□□ -1.38
SCAF4-204ENST00000467731 C14orf105Q9NVL8 296 aa6.43□□□□□ -1.38
SCAF4-204ENST00000467731 FAM120CQ9NX05 1096 aaKnown RBP6.43□□□□□ -1.38
SCAF4-204ENST00000467731 GPN3Q9UHW5 284 aaPredicted RBP6.43□□□□□ -1.38
SCAF4-204ENST00000467731 LEF1Q9UJU2 399 aaPredicted RBP6.43□□□□□ -1.38
SCAF4-204ENST00000467731 AK5Q9Y6K8 562 aa6.43□□□□□ -1.38
SCAF4-204ENST00000467731 A0A1W2PRB8 838 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 TRABD2BA6NFA1 517 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 BBIP1A8MTZ0 92 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 MYO1GB0I1T2 1018 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 IDSB3KWA1 339 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 DXOO77932 396 aaKnown RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 C6orf47O95873 294 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 RECKO95980 971 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 ABCB1P08183 1280 aaPredicted RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CPMP14384 443 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 TCN2P20062 427 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 NTSP30990 170 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 MPIP34949 423 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 ID4P47928 161 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 NCBP2P52298 156 aaKnown RBP eCLIP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 HSPB3Q12988 150 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 RTP5Q14D33 572 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 NSDHLQ15738 373 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 ZNF551Q7Z340 670 aaPredicted RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 PATL1Q86TB9 770 aaKnown RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 LRRC25Q8N386 305 aaPredicted RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 ENDOVQ8N8Q3 282 aaKnown RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 FBXO27Q8NI29 283 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 AMDHD1Q96NU7 426 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 PANX1Q96RD7 426 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 INPP5KQ9BT40 448 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 ALOXE3Q9BYJ1 711 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 RMND5AQ9H871 391 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 RNPEPL1Q9HAU8 725 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 MAP10Q9P2G4 905 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 WASF3Q9UPY6 502 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 MMACHCQ9Y4U1 282 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 IGKV3D-11A0A0A0MRZ8 115 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 RFXANKO14593 260 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 RAD1O60671 282 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 KLF7O75840 302 aaPredicted RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CPSF4O95639 269 aaKnown RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CSNK2A2P19784 350 aaPredicted RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CD82P27701 267 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 STAT5AP42229 794 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CDKN2CP42773 168 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 NUDT2P50583 147 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 LTB4RQ15722 352 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CDONQ4KMG0 1287 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 ANXA8L1Q5VT79 327 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 MSANTD1Q6ZTZ1 278 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 LANCL3Q6ZV70 420 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 NATD1Q8N6N6 113 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 ADCY4Q8NFM4 1077 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 OR9A2Q8NGT5 310 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CT55Q8WUE5 264 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 PPWD1Q96BP3 646 aaKnown RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CCDC115Q96NT0 180 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CIB1Q99828 191 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 MESP1Q9BRJ9 268 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 WDR54Q9H977 334 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 IL1RL2Q9HB29 575 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 C12orf4Q9NQ89 552 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 THSD1Q9NS62 852 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 SLC6A13Q9NSD5 602 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 ACSS1Q9NUB1 689 aaPredicted RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 PTTG2Q9NZH5 202 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 C3orf18Q9UK00 162 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 NXT1Q9UKK6 140 aaKnown RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 MGAQ8IWI9 3026 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CHD8Q9HCK8 2581 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 MRASO14807 208 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 UNC5CO95185 931 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 ATP1B1P05026 303 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 GSNP06396 782 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 HEXBP07686 556 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 PABPC4LP0CB38 370 aaKnown RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 HAAOP46952 286 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 PTDSS1P48651 473 aaKnown RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 RPS18P62269 152 aaKnown RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 AP2B1P63010 937 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 KCNJ2P63252 427 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 IGLV3-21P80748 117 aaPredicted RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 GNA13Q14344 377 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 GTDC1Q4AE62 458 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 COQ5Q5HYK3 327 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 DTX1Q86Y01 620 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 ST13P4Q8IZP2 240 aaPredicted RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CADM3Q8N126 398 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 DPP10Q8N608 796 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 PCYOX1LQ8NBM8 494 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 OR4A15Q8NGL6 344 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 NXPE2Q96DL1 559 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 RBM18Q96H35 190 aaKnown RBP6.42□□□□□ -1.38
SCAF4-204ENST00000467731 ITCHQ96J02 903 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 CRB3Q9BUF7 120 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 EFCAB1Q9HAE3 211 aa6.42□□□□□ -1.38
SCAF4-204ENST00000467731 NEUROD4Q9HD90 331 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms