RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 LRIG3Q6UXM1 1119 aa12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 CCDC116Q8IYX3 515 aa12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 CLYBLQ8N0X4 340 aa12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 ACBD4Q8NC06 268 aa12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 NUBPLQ8TB37 319 aa12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 CA5BP1Q8WTZ4 195 aa12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 ASB5Q8WWX0 329 aa12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 EXOSC8Q96B26 276 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 PKNOX2Q96KN3 472 aa12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 ENKD1Q9H0I2 346 aa12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 SIRT5Q9NXA8 310 aa12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 BCAP29Q9UHQ4 241 aa12.98□□□□□ -0.33
CCHCR1-211ENST00000467553 OR6C76A6NM76 312 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 TMEM233B4DJY2 109 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 ACOT7O00154 380 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 ADAM10O14672 748 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 RSL1D1O76021 490 aaKnown RBP12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 CLPSP04118 112 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 NEFHP12036 1026 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 SERPINB4P48594 390 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 DUSP2Q05923 314 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 FUT7Q11130 342 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 MPEG1Q2M385 716 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 SH2D4BQ5SQS7 431 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 HLA-DQA1Q5Y7H0 255 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 KANK2Q63ZY3 851 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 NOXRED1Q6NXP6 359 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 Q6ZSR9 355 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 DDIASQ8IXT1 998 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 SLC22A8Q8TCC7 542 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 C11orf24Q96F05 449 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 CNRIP1Q96F85 164 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 SGCZQ96LD1 299 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 TREX2Q9BQ50 279 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 WWTR1Q9GZV5 400 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 OR10A5Q9H207 317 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 TP63Q9H3D4 680 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 TUBB1Q9H4B7 451 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 LRTM1Q9HBL6 345 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 SLC24A3Q9HC58 644 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 GIMAP4Q9NUV9 329 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 C1orf109Q9NX04 203 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 CCL27Q9Y4X3 112 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 DNAJC15Q9Y5T4 150 aa12.97□□□□□ -0.33
CCHCR1-211ENST00000467553 A0A1B0GTH9 108 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 OR14I1A6ND48 311 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 G3V3Y1 287 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 S1PR1P21453 382 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 RFC3P40938 356 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 GSTM5P46439 218 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 NR0B1P51843 470 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 ZNF763Q0D2J5 394 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 MGAT2Q10469 447 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 MAP4K2Q12851 820 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 EXOSC7Q15024 291 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 EBPQ15125 230 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 LTB4RQ15722 352 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 PRICKLE4Q2TBC4 344 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 CMPK2Q5EBM0 449 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 TNFAIP8L3Q5GJ75 292 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 BEND6Q5SZJ8 279 aaPredicted RBP12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 RTL4Q6ZR62 310 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 FGD2Q7Z6J4 655 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 ZNF295-AS1Q8N0V1 137 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 LRRC25Q8N386 305 aaPredicted RBP12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 ZNF615Q8N8J6 731 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 GOLM1Q8NBJ4 401 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 PSD4Q8NDX1 1056 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 OR7G1Q8NGA0 311 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 OR2T11Q8NH01 316 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 FAM76AQ8TAV0 307 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 TWIST2Q8WVJ9 160 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 PGM2Q96G03 612 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 ZNF681Q96N22 645 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 BBS4Q96RK4 519 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 SSU72Q9NP77 194 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 SLC35C2Q9NQQ7 365 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 MAT2BQ9NZL9 334 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 ZDHHC2Q9UIJ5 367 aa12.96□□□□□ -0.33
CCHCR1-211ENST00000467553 PHF3Q92576 2039 aaKnown RBP12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 PIP5K1BO14986 540 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 TM9SF1O15321 606 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 HS6ST1O60243 411 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 NADKO95544 446 aaPredicted RBP12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 ATP1B1P05026 303 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 TPOP07202 933 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 CNR1P21554 472 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 CHRNB4P30926 498 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 ARRB2P32121 409 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 SERPINB5P36952 375 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 HSF1Q00613 529 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 MPP2Q14168 576 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 KIAA0040Q15053 153 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 CHI3L2Q15782 390 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 UGT3A2Q3SY77 523 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 GALNTL6Q49A17 601 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 TRMT12Q53H54 448 aaKnown RBP12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 FAM71E1Q6IPT2 247 aa12.95□□□□□ -0.34
CCHCR1-211ENST00000467553 TMEM64Q6YI46 380 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms