RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 LOC400499M0QZD8 3231 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 MAP1BP46821 2468 aaKnown RBP14.13□□□□□ -0.15
NPHP4-205ENST00000466897 HRKO00198 91 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 RFXANKO14593 260 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 ANGPT2O15123 496 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 EMC8O43402 210 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 ERN1O75460 977 aaKnown RBP14.12□□□□□ -0.15
NPHP4-205ENST00000466897 ITGB2P05107 769 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 SSTR4P31391 388 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 Q0VFX4 171 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 LRIF1Q5T3J3 769 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 ZCCHC12Q6PEW1 402 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 BHLHB9Q6PI77 547 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 HSDL2Q6YN16 418 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 ANKRD46Q86W74 232 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 LGI4Q8N135 537 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 OR56A1Q8NGH5 318 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 HOXB13Q92826 284 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-205ENST00000466897 KAT2AQ92830 837 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 CMTM5Q96DZ9 223 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 FAM120BQ96EK7 910 aaKnown RBP14.12□□□□□ -0.15
NPHP4-205ENST00000466897 MS4A4EQ96PG1 132 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 NUDT9Q9BW91 350 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 LHPPQ9H008 270 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 CXorf36Q9H7Y0 433 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 GMEB1Q9Y692 573 aa14.12□□□□□ -0.15
NPHP4-205ENST00000466897 A0A096LPI6 279 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 ARGFXA6NJG6 315 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 TTC36A6NLP5 189 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 CDK2AP1O14519 115 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 CEACAM4O75871 244 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 ZFAND5O76080 213 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 NPPAP01160 153 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 CD1EP15812 388 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 HOXB9P17482 250 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-205ENST00000466897 EFNA1P20827 205 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-205ENST00000466897 UQCRC2P22695 453 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 PTPN6P29350 595 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 PTGER1P34995 402 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 MAGEA8P43361 318 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 EMDP50402 254 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 PSPHP78330 225 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 STX5Q13190 355 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 DUSP8Q13202 625 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 CYLC2Q14093 348 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-205ENST00000466897 MYBPC3Q14896 1274 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 EBPQ15125 230 aaKnown RBP14.11□□□□□ -0.15
NPHP4-205ENST00000466897 DEFB109BQ30KR1 87 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 SNX32Q86XE0 403 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 TREML1Q86YW5 311 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 ZNF321PQ8N8H1 164 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 OR52R1Q8NGF1 315 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 OR5L2Q8NGL0 311 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 C16orf52Q8NHV5 167 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 APOBEC4Q8WW27 367 aaKnown RBP14.11□□□□□ -0.15
NPHP4-205ENST00000466897 ZCCHC3Q9NUD5 404 aaKnown RBP14.11□□□□□ -0.15
NPHP4-205ENST00000466897 VPS4AQ9UN37 437 aa14.11□□□□□ -0.15
NPHP4-205ENST00000466897 USP24Q9UPU5 2620 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 TRBV11-1A0A0K0K1C0 115 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 FBP2O00757 339 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 SOX30O94993 753 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 KCNH1O95259 989 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 CDKN2CP42773 168 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 CCT3P49368 545 aaKnown RBP14.1□□□□□ -0.15
NPHP4-205ENST00000466897 DCAF7P61962 342 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 RNF4P78317 190 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 TXNL4AP83876 142 aaKnown RBP14.1□□□□□ -0.15
NPHP4-205ENST00000466897 GAB1Q13480 694 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 KRT72Q14CN4 511 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 EXOSC7Q15024 291 aaKnown RBP14.1□□□□□ -0.15
NPHP4-205ENST00000466897 PAGE3Q5JUK9 113 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 EXOSC6Q5RKV6 272 aaKnown RBP14.1□□□□□ -0.15
NPHP4-205ENST00000466897 BORAQ6PGQ7 559 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 SLC2A7Q6PXP3 512 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 SLC29A4Q7RTT9 530 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 C9orf40Q8IXQ3 194 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 GALNT16Q8N428 558 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 SLC5A8Q8N695 610 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 FITM2Q8N6M3 262 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 ZNF441Q8N8Z8 693 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 NUP43Q8NFH3 380 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 PSMF1Q92530 271 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 TP53INP1Q96A56 240 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 GIMAP5Q96F15 307 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 VSTM2LQ96N03 204 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 INPP5KQ9BT40 448 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 DEFB126Q9BYW3 111 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 WWTR1Q9GZV5 400 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 PAIP1Q9H074 479 aaKnown RBP14.1□□□□□ -0.15
NPHP4-205ENST00000466897 GIN1Q9NXP7 522 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 BCAP29Q9UHQ4 241 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 HEMK1Q9Y5R4 338 aaPredicted RBP14.1□□□□□ -0.15
NPHP4-205ENST00000466897 SNX8Q9Y5X2 465 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 EPG5Q9HCE0 2579 aa14.1□□□□□ -0.15
NPHP4-205ENST00000466897 TRBV5-3A0A0A0MS03 114 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 RNF103-CHMP3A0A140T963 221 aa14.09□□□□□ -0.15
NPHP4-205ENST00000466897 CPSF4O95639 269 aaKnown RBP14.09□□□□□ -0.15
NPHP4-205ENST00000466897 ABCB1P08183 1280 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-205ENST00000466897 CELA2AP08217 269 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms