RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ITGBL1O95965 494 aaPredicted RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 KCNC4Q03721 635 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 GINS1Q14691 196 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 ATXN7L3Q14CW9 347 aaPredicted RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 SLC18B1Q6NT16 456 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 WDR20Q8TBZ3 569 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 SPTSSAQ969W0 71 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 BIRC7Q96CA5 298 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 CPEB1Q9BZB8 566 aaKnown RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 RETREG1Q9H6L5 497 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 SRA1Q9HD15 236 aaKnown RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 ACTR3BQ9P1U1 418 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 RNF6Q9Y252 685 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 NAALAD2Q9Y3Q0 740 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 SMIM30A4D0T7 59 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 RBBP9O75884 186 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 RGS9O75916 674 aaPredicted RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 ALDOAP04075 364 aaKnown RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 CD79AP11912 226 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 TIA1P31483 386 aaKnown RBP eCLIP8.31□□□□□ -1.08
HPS4-209ENST00000466781 ATP4BP51164 291 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 RHDQ02161 417 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 LRRC37A5PQ49AS3 106 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 RTP2Q5QGT7 225 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 CRTC1Q6UUV9 634 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 AURKBQ96GD4 344 aaPredicted RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 CNN2Q99439 309 aaKnown RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 HOXD1Q9GZZ0 328 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 EBF2Q9HAK2 575 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 HIF3AQ9Y2N7 669 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 ANKRD34BA5PLL1 514 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 C2orf78A6NCI8 922 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 ZNF43P17038 809 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 ACSBG2Q5FVE4 666 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 MAMDC2Q7Z304 686 aaPredicted RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 MAFIPQ8WZ33 124 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 ZNF689Q96CS4 500 aaPredicted RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 OR52B2Q96RD2 323 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 SLC30A2Q9BRI3 323 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 ZNF649Q9BS31 505 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 ZNF576Q9H609 170 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 VIRMAQ69YN4 1812 aaKnown RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 TRAV6A0A075B6T7 132 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 H3BQ06 376 aaPredicted RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 MEN1O00255 615 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 CYB5BO43169 146 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 PRAMEF2O60811 474 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 MSL3P1P0C860 447 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 C6P13671 934 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 DDCP20711 480 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 SUOXP51687 545 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 NIPAL4Q0D2K0 466 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 ELAVL3Q14576 367 aaKnown RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 DCAF12L1Q5VU92 463 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 AWAT2Q6E213 333 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 DPY19L4Q7Z388 723 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 TLCD1Q96CP7 247 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 ARL5BQ96KC2 179 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 TMEM74Q96NL1 305 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 DPH7Q9BTV6 452 aa8.31□□□□□ -1.08
HPS4-209ENST00000466781 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.31□□□□□ -1.08
HPS4-209ENST00000466781 BEST1O76090 585 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 PRLP01236 227 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 HOXD13P35453 343 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 AGTR2P50052 363 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 AKR1C2P52895 323 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 SLC25A11Q02978 314 aaKnown RBP8.3□□□□□ -1.08
HPS4-209ENST00000466781 SOX4Q06945 474 aaPredicted RBP8.3□□□□□ -1.08
HPS4-209ENST00000466781 INCA1Q0VD86 236 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 PKDCCQ504Y2 493 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 SLC27A4Q6P1M0 643 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 TRIM46Q7Z4K8 759 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 IQCKQ8N0W5 287 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 S100PBPQ96BU1 408 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 GIMAP5Q96F15 307 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 PIP5K1AQ99755 562 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 CCDC163A0A0D9SF12 145 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 EFCAB7A8K855 629 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 TMX2-CTNND1H3BSU7 103 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 DLGAP1O14490 977 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 FESP07332 822 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 DRD2P14416 443 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 RPP30P78346 268 aaKnown RBP8.3□□□□□ -1.08
HPS4-209ENST00000466781 TLE3Q04726 772 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 UBE2UQ5VVX9 321 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 EPGNQ6UW88 154 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 NXPE4Q6UWF7 544 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 GPRIN1Q7Z2K8 1008 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 GALNT10Q86SR1 603 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 TMPRSS12Q86WS5 348 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 TDHQ8IZJ6 230 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 LPAR4Q99677 370 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 RGCCQ9H4X1 137 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 MAN2C1Q9NTJ4 1040 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 KLHL13Q9P2N7 655 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 GJD2Q9UKL4 321 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 SCML1Q9UN30 329 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 A0A0A6YYH2 397 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 A6NJ64 397 aa8.3□□□□□ -1.08
HPS4-209ENST00000466781 ERP29P30040 261 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms