RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 CLPSP04118 112 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 ALDOCP09972 364 aaKnown RBP12.87□□□□□ -0.35
UBA3-209ENST00000466763 S1PR1P21453 382 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 MC3RP41968 323 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 CYB561P49447 251 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 IDH3AP50213 366 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 NR0B1P51843 470 aaKnown RBP12.87□□□□□ -0.35
UBA3-209ENST00000466763 C19orf57Q0VDD7 668 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 SF3A3Q12874 501 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■□□□□ 9.1
UBA3-209ENST00000466763 ZNF169Q14929 603 aaPredicted RBP12.87□□□□□ -0.35
UBA3-209ENST00000466763 EBPQ15125 230 aaKnown RBP12.87□□□□□ -0.35
UBA3-209ENST00000466763 OR1C1Q15619 314 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 CEBPEQ15744 281 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 MPEG1Q2M385 716 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 LSM12Q3MHD2 195 aaKnown RBP12.87□□□□□ -0.35
UBA3-209ENST00000466763 ZNF468Q5VIY5 522 aaPredicted RBP12.87□□□□□ -0.35
UBA3-209ENST00000466763 SPINK14Q6IE38 97 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 OGFOD2Q6N063 350 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 IL20RBQ6UXL0 311 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 Q6ZS92 163 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 ZNF615Q8N8J6 731 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 OR7G2Q8NG99 324 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 C16orf52Q8NHV5 167 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 NUBPLQ8TB37 319 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 SLC22A8Q8TCC7 542 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 PNPLA2Q96AD5 504 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 MAELQ96JY0 434 aaKnown RBP12.87□□□□□ -0.35
UBA3-209ENST00000466763 RASL10BQ96S79 203 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 ZBTB18Q99592 522 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 EBF4Q9BQW3 602 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 DUSP26Q9BV47 211 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 RNF32Q9H0A6 362 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 TCF7L2Q9NQB0 619 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 KLHL1Q9NR64 748 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 DDX18Q9NVP1 670 aaKnown RBP12.87□□□□□ -0.35
UBA3-209ENST00000466763 AIG1Q9NVV5 245 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 HPF1Q9NWY4 346 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 PRODH2Q9UF12 536 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 DCTN4Q9UJW0 460 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 MAPRE3Q9UPY8 281 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 CFL2Q9Y281 166 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 TRAV17A0A0B4J275 112 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 B8ZZF3 427 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 E9PBE3 544 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 NME6O75414 186 aaPredicted RBP12.86□□□□□ -0.35
UBA3-209ENST00000466763 C1QL1O75973 258 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 ABCB1P08183 1280 aaPredicted RBP12.86□□□□□ -0.35
UBA3-209ENST00000466763 MDH1P40925 334 aaKnown RBP12.86□□□□□ -0.35
UBA3-209ENST00000466763 SOX3P41225 446 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 TNFSF10P50591 281 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 HLCSP50747 726 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 PRKAG1P54619 331 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 UFM1P61960 85 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 NNATQ16517 81 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 PIGGQ5H8A4 983 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 OR4F3Q6IEY1 312 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 RIMKLAQ8IXN7 391 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 CYP4Z2PQ8N1L4 340 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 HORMAD2Q8N7B1 307 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 TMEM125Q96AQ2 219 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 CTHRC1Q96CG8 243 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 COQ8BQ96D53 544 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 ELP4Q96EB1 424 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 ZNF764Q96H86 408 aaPredicted RBP12.86□□□□□ -0.35
UBA3-209ENST00000466763 C5orf34Q96MH7 638 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 RILPQ96NA2 401 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 SIGLEC12Q96PQ1 595 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 ITPAQ9BY32 194 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 FGFR1OP2Q9NVK5 253 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 ZNF639Q9UID6 485 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 ATMQ13315 3056 aa12.86□□□□□ -0.35
UBA3-209ENST00000466763 C9JVG2 144 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 PLOD3O60568 738 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 COQ9O75208 318 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 OR6B1O95007 311 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 CPSF4O95639 269 aaKnown RBP12.85□□□□□ -0.35
UBA3-209ENST00000466763 C6orf47O95873 294 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 NUDT7P0C024 238 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 TROVE2P10155 538 aaKnown RBP eCLIP12.85□□□□□ -0.35
UBA3-209ENST00000466763 IDO1P14902 403 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 CD46P15529 392 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 GPX3P22352 226 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 S100A3P33764 101 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 SOX18P35713 384 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 CDK9P50750 372 aaKnown RBP12.85□□□□□ -0.35
UBA3-209ENST00000466763 CLNS1AP54105 237 aaKnown RBP12.85□□□□□ -0.35
UBA3-209ENST00000466763 NRG3P56975 720 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 STX1BP61266 288 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 SRSF11Q05519 484 aaKnown RBP12.85□□□□□ -0.35
UBA3-209ENST00000466763 ZNF155Q12901 538 aaPredicted RBP12.85□□□□□ -0.35
UBA3-209ENST00000466763 DUSP8Q13202 625 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 MAPKAPK3Q16644 382 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 GSTA3Q16772 222 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 SPDYE7PQ495Y7 208 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 ZNF766Q5HY98 468 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 OPN5Q6U736 354 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 TMEM64Q6YI46 380 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 PRR22Q8IZ63 422 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 TAGAPQ8N103 731 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 NATD1Q8N6N6 113 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms